EBG00000313325 - n.440A>G
Drug resistance types
42 Sensitive
38 RR-TB
16 HR-TB
17 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
83 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 3 |
| lineage4.1.2 | 2 |
| lineage2.2.1 | 13 |
| lineage4.3.3 | 7 |
| lineage4.2.1 | 2 |
| lineage4.8 | 48 |
| lineage4.9 | 59 |
| lineage4.1.2.1 | 5 |
| La1.8.1 | 4 |
| La2 | 22 |
| lineage4.8.1 | 3 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.1.3 | 3 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 3 |
| La1.4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8.2 | 1 |
| lineage3 | 3 |
| La1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.2.2.2 | 3 |
| lineage4.3 | 1 |
| lineage6 | 1 |
| lineage2.2.1.1 | 1 |
| 1 | |
| lineage4.3.2 | 1 |
| lineage4.2.2 | 1 |
| lineage2.2.2 | 1 |
| La1.7;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 205 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR7236134 | Other | La1.8.1 | None | SRR1792165 | Other | La2 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR911929 | Other | lineage4.8 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR27836871 | Sensitive | La2 | None | ERR867571 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR5818452 | Other | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR10796565 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | ERR4821143 | Other | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR5818394 | Other | lineage4.9 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR27836876 | Sensitive | La2 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR3135069 | Sensitive | La2 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR978693 | Other | lineage4.8 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR911930 | Other | lineage4.8 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR867572 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR5818466 | Other | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR5818464 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR7617847 | Other | La1.8.1 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR5818408 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR10796598 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR13149108 | Sensitive | La2 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR1792164 | Sensitive | La2 | None | ERR4818536 | Other | lineage4.9 | None | SRR7617662 | Sensitive | La2 | None | SRR27836873 | Sensitive | La2 | None | SRR27836872 | Sensitive | La2 | None | ERR978694 | Other | lineage4.8 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR978727 | Other | lineage4.8 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR17156538 | Sensitive | La2 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR978752 | Other | lineage4.8 | None | SRR5818400 | Other | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR867574 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR13149109 | Sensitive | La2 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR978762 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9786076 | Sensitive | lineage3 | None | ERR13149106 | Sensitive | La2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | ERR9787336 | RR-TB | lineage6 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR27836869 | Sensitive | La2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR978747 | Other | lineage4.8 | None | ERR2228900 | Other | lineage4.8 | None | SRR7236330 | Other | La1.8.1 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR2510516 | RR-TB | lineage3 | pk | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR27836868 | Sensitive | La2 | None | SRR27836875 | Sensitive | La2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR27836870 | Sensitive | La2 | None | SRR5818389 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR978751 | Other | lineage4.8 | None | DRR120408 | Sensitive | La2 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR2228910 | Other | lineage4.8 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR18914189 | Sensitive | La2 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR5818415 | Sensitive | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR16503843 | Sensitive | La2 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR13149107 | Sensitive | La2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR5818399 | Sensitive | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | DRR120409 | HR-TB | La2 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR978748 | Other | lineage4.8 | None | DRR184982 | Other | lineage2.2.1 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR3797019 | Other | La1.8.1 | None | SRR5818386 | Other | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR11068622 | Sensitive | La2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR5818391 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
|---|
