EBG00000313325 - n.440A>G
Drug resistance types
30 Sensitive
51 RR-TB
28 HR-TB
17 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
168 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.3 | 1 |
| lineage4.1.2.1 | 19 |
| lineage4.3.3 | 8 |
| lineage5 | 2 |
| lineage4.8 | 26 |
| 10 | |
| lineage4.3.2.1 | 2 |
| lineage4.1.1 | 2 |
| lineage3 | 32 |
| lineage1.1.2 | 4 |
| lineage1.1.3.1 | 3 |
| lineage4.9 | 61 |
| lineage4.8.2 | 2 |
| lineage4.2.1 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4 | 20 |
| lineage4.3.1 | 1 |
| lineage4.1.1.3.1 | 4 |
| La2 | 9 |
| lineage2.2.1 | 26 |
| lineage4.4.1.1 | 10 |
| lineage4.2.2 | 2 |
| lineage4.3.2 | 2 |
| lineage4.3.4.1 | 3 |
| lineage4.1.2 | 2 |
| lineage1.1.3 | 2 |
| lineage4.3.4 | 1 |
| La1.8.1 | 1 |
| La1.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage3.1.1 | 3 |
| lineage6 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.4 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage2.2.1.1 | 4 |
| lineage1.2.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.6.5 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2 | 2 |
| La1.8.2 | 1 |
| lineage3.1.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.5 | 5 |
| lineage2.2 | 1 |
| lineage4.7 | 1 |
| lineage4.8.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage3.1.2.1 | 1 |
| lineage1 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 307 |
Geographic prevalence
Country level data for this variant is available for 35 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR4821310 | Other | lineage5 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4821214 | RR-TB | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822035 | Other | lineage4.8 | None | ERR4822093 | Sensitive | lineage4.1.1 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821563 | HR-TB | lineage1.1.2 | gb | ERR4821679 | Other | lineage4.3.3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | SRR5818391 | Other | lineage4.9 | None | ERR4821725 | Other | lineage4.8.2 | gb | SRR6045664 | Other | lineage4.2.1 | None | SRR5818394 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818415 | Sensitive | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818441 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818470 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6046020 | Other | lineage3 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046481 | Other | lineage4.1.1.3.1 | None | SRR6046442 | Other | lineage3 | None | ERR4828879 | MDR-TB | lineage3 | None | DRR120409 | HR-TB | La2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046815 | Other | lineage3 | None | ERR3275190 | Other | lineage3 | nl | SRR8651616 | MDR-TB | lineage2.2.1 | None | DRR120408 | Sensitive | La2 | None | DRR188816 | Sensitive | lineage4.2.2 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR019855 | Other | lineage3 | None | ERR017781 | Other | lineage3 | None | ERR1063855 | Other | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR114475 | HR-TB | lineage3 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796635 | Other | lineage4 | None | ERR114428 | Sensitive | lineage1.1.3 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796629 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796634 | Other | lineage4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR3797015 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283040 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | ERR3797080 | HR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6359070 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9787336 | Other | lineage6 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR16278274 | Other | La1.4 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR16370682 | Sensitive | lineage2.2.1 | None | SRR16503843 | Sensitive | La2 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR17156538 | Sensitive | La2 | None | SRR1792165 | Sensitive | La2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR1792164 | Sensitive | La2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR19233771 | Sensitive | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18914189 | Sensitive | La2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR2100277 | Sensitive | lineage1.1.3 | None | SRR2100323 | HR-TB | lineage3 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068622 | Sensitive | La2 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4814312 | Other | lineage4 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4814362 | Other | lineage4.8 | None | ERR4815310 | Other | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4815777 | Other | lineage4.9 | None | SRR3135069 | Sensitive | La2 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814748 | Other | lineage4.8 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4814881 | Other | lineage2.2.1 | gb | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR4815550 | Other | lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4814986 | Other | lineage4.3.4.2 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4815077 | Other | lineage2.2.1.1 | gb | ERR4815101 | Other | lineage3 | gb | ERR4816964 | Other | lineage4.9 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4816133 | Other | La1.8.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | SRR3675565 | Other | lineage3 | None | ERR4817060 | RR-TB | None | ERR4817392 | Other | lineage4.1.2.1 | gb | ERR2446509 | Other | lineage3 | nl | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4817434 | Other | lineage3 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816627 | Other | lineage2.2 | None | SRR4034186 | Sensitive | lineage4.3.2.1 | None | SRR5818386 | Other | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4816856 | Other | lineage4.1.2.1 | None | ERR2229810 | Other | lineage4.8 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR2510516 | RR-TB | lineage3 | pk | ERR4817826 | RR-TB | lineage4.5 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR2513398 | Other | lineage4.2.1 | gb | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4817948 | Other | lineage3 | gb | ERR4819017 | RR-TB | lineage3 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR2513401 | HR-TB | lineage3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818208 | Other | lineage4.1.1.3.1 | gb | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR2512599 | Other | lineage3 | gb | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4819051 | Other | lineage4 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818563 | Other | lineage3 | gb | ERR2512716 | HR-TB | lineage4.6.2.2 | gb | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR2513830 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4820266 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819528 | RR-TB | lineage3 | None | ERR2514173 | Other | lineage4.5 | gb | ERR2514215 | Other | lineage2.2.1 | gb | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR4820324 | Other | lineage4 | None | ERR4819404 | Other | lineage4.1.2.1 | gb | ERR4819462 | Other | lineage4 | None | ERR4819550 | Other | lineage3 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820397 | Other | lineage4.9 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR2514692 | Other | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4820817 | Other | lineage4.1.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2515007 | Other | lineage3 | None | ERR2514943 | Other | lineage4.8 | gb | ERR4820833 | HR-TB | None | ERR4820193 | Other | lineage3 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820161 | Other | lineage3 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | SRR6046117 | RR-TB | lineage4.9 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4820922 | Other | lineage4.1.2.1 | gb | ERR4821812 | Other | lineage4.8 | gb | ERR4821119 | Other | lineage4.4.1.1 | None | SRR5526844 | Pre-XDR-TB | lineage2.2.1.1 | pg | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
