EBG00000313339 - n.545delT


Drug resistance types
35 Sensitive 55 RR-TB 31 HR-TB 21 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 270 Other
lineage Counts
lineage Count
lineage2.2 4
lineage4.9 39
lineage4.1.2.1 50
lineage3 44
lineage1.2.2 1
lineage4.8 34
lineage4.7 6
lineage4 21
11
lineage4.4.2 2
lineage4.3.4.2.1 6
lineage4.4.1.1 16
lineage3.1.1 6
lineage3.1.2 1
lineage4.1 4
lineage2.2.1 34
lineage1.1.3.1 6
lineage4.3.3 20
lineage4.1.2 6
lineage4.1.1 4
lineage1.1.2 13
lineage4.6.5 1
lineage4.3.4.2 5
lineage2.2.1.1 3
lineage3.1.2.1 4
lineage1.2.2.2 5
lineage4.2.1.1 2
lineage4.3.4.1 7
lineage5 2
La1.8.2 1
lineage1.1.3 2
lineage1.2.1.1 1
lineage4.6.1.2 1
lineage4.6 2
lineage4.8.2 1
lineage4.1.1.3 6
lineage4.5 2
lineage1.1.1 3
lineage1.1.3.3 3
lineage1 2
lineage2.2.2 1
lineage6 2
lineage4.3.2 4
lineage1.2.1.2.1 4
lineage4.1.1.3.1 3
lineage4.6.2.2 5
lineage2.2.1.2 1
lineage4.1.4 1
lineage3.1.3 1
lineage4.3.1.1 4
lineage6.1.3 1
lineage4.3.2.1 1
lineage4.1.3 1
lineage4.1.3;lineage1.1.3.1 1
lineage2.1 1
lineage3.1.2.2 3
La1.6 1
lineage4.2.2.2 1
lineage4.2.1 1
lineage3.1 1
lineage4.6.1.1 1
lineage4.3.4 1
La1.3 1
La1.2 1
lineage4.9;La1.3 1
lineage4.8.1 1
lineage4.4.1.2 1
spoligotype Counts
spoligotype Count
None 426
Geographic prevalence
Country level data for this variant is available for 20 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4815118 Other lineage2.2 None
ERR176780 Sensitive lineage4.9 None
ERR4815165 Other lineage4.1.2.1 None
ERR4815613 Other lineage3 None
ERR4815225 RR-TB lineage1.2.2 None
ERR4815193 MDR-TB lineage4.8 None
ERR4814341 Other lineage4.7 None
ERR4815268 Other lineage4.8 None
ERR4814312 Other lineage4 None
ERR4815310 Other None
ERR4815255 Other lineage4.4.2 None
ERR4815298 Other lineage4.3.4.2.1 None
ERR4815301 Other lineage4.4.2 None
ERR4814300 HR-TB lineage4.4.1.1 None
ERR245848 Sensitive lineage4.3.4.2.1 mw
ERR4814415 Other lineage3.1.1 None
ERR4814356 Pre-XDR-TB lineage3.1.2 None
ERR4814362 Other lineage4.8 None
ERR4815777 Other lineage4.9 None
ERR4814472 Other lineage4.1 None
ERR4814681 Other lineage2.2.1 None
ERR4814617 Other lineage1.1.3.1 None
ERR4815452 Other lineage4.3.3 None
ERR4814496 RR-TB lineage4.1.2 None
ERR4815698 RR-TB lineage4.7 None
ERR4815709 Sensitive lineage4.1.2.1 None
ERR4814714 Other lineage3 None
ERR4814709 Other lineage4.1.1 None
SRR3675230 RR-TB lineage3 None
ERR4815467 Other lineage3 None
ERR4814775 Other lineage1.1.2 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4814748 Other lineage4.8 None
ERR4814763 Other lineage2.2.1 None
ERR4814745 Other lineage4.6.5 None
SRR3675245 Other lineage4.1.2.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR4815502 Other lineage4.1 None
ERR4814841 Other lineage4.1 None
ERR4815499 Other lineage4.3.4.2 None
ERR4814896 Other lineage2.2.1.1 None
ERR4815729 Other lineage4.1.2.1 None
ERR4814874 MDR-TB lineage1.1.2 None
ERR4815534 Other lineage4 None
ERR4814952 Sensitive lineage3 None
ERR4814930 Other lineage4.4.1.1 None
ERR4814911 Other lineage4.3.3 None
ERR4814986 Other lineage4.3.4.2 None
ERR4815550 Other lineage4 None
ERR4815022 Other lineage3.1.2.1 None
ERR4815792 Other lineage4.1.2.1 None
ERR176740 HR-TB None
ERR4816954 Other lineage4.1.2.1 None
ERR4815572 Other lineage4.1.2.1 None
ERR4816944 RR-TB lineage2.2 None
ERR4816928 HR-TB lineage1.2.2.2 None
ERR4817313 HR-TB lineage4.2.1.1 None
ERR4817308 Other lineage4.3.4.1 None
ERR4817464 Other lineage3.1.1 None
ERR4815919 Other lineage4.8 None
ERR4816967 RR-TB lineage5 None
ERR4815901 Other lineage2.2 None
ERR4815898 Other lineage3 None
ERR4815910 Other lineage4.1.2.1 None
ERR4815909 Other lineage4.8 None
ERR4815920 Other lineage3 None
ERR4815944 HR-TB lineage4.1.2.1 None
ERR4815956 Other lineage1.1.2 None
ERR4816009 Other lineage1.1.2 None
ERR4816982 Other lineage4 None
ERR4816133 Other La1.8.2 None
ERR4816015 HR-TB lineage4.4.1.1 None
SRR3675527 RR-TB lineage4.9 None
ERR4816093 Other lineage1.1.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4816183 Other None
ERR4817478 Other lineage3 None
SRR3675552 RR-TB lineage4.9 None
ERR4816232 Other lineage4 None
ERR4816283 Other lineage4.1.2.1 None
ERR4816243 Sensitive lineage3 None
ERR4816270 Other lineage4.1.2.1 None
ERR4816397 Other lineage1.1.2 None
SRR3675565 Other lineage3 None
ERR4817060 RR-TB None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816429 Other lineage1.1.2 None
ERR4816417 Other lineage4.9 None
ERR4816464 Other lineage3 None
ERR4816462 Other lineage4.1.2.1 None
ERR4816476 Other lineage3.1.2.1 None
ERR2229233 Sensitive lineage4 None
ERR4817131 Pre-XDR-TB None
ERR4816531 Other lineage4.1.2 None
ERR4816493 Other lineage4.1.2.1 None
ERR4816510 Other lineage4.1.2.1 None
ERR4816549 Other lineage2.2.1 None
ERR4817134 HR-TB lineage2.2.1 None
ERR4816571 Other lineage1.1.2 None
ERR4816604 RR-TB lineage4.1.2 None
ERR4816692 Other lineage4.1.2.1 None
ERR4817175 Other lineage4.8 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816627 Other lineage2.2 None
ERR4817189 Other lineage4.7 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816696 Other lineage3 None
ERR4816699 Other lineage4.6 None
ERR4817497 Other lineage1.1.2 None
ERR4816756 RR-TB None
ERR2229692 Other lineage4.8 None
ERR4816782 Other lineage4.1.2.1 None
ERR4816831 Other lineage4.1.2.1 None
ERR4817435 Other lineage1.1.3.1 None
ERR4816818 Other lineage4.8.2 None
ERR4816856 Other lineage4.1.2.1 None
ERR4816833 Other lineage4.1.1.3 None
ERR4817688 Other lineage4.3.4.2 None
ERR4815811 HR-TB lineage4.2.1.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4816866 Other lineage2.2.1 None
ERR4817293 Sensitive lineage4.1.2 None
ERR4816883 Other lineage4.5 None
ERR4817452 Other lineage4.8 None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR4817703 Other lineage1.1.1 None
ERR4817751 Other lineage1.1.3.3 None
ERR4817708 Sensitive lineage4.8 None
ERR4817710 Other lineage1.1.2 None
ERR4818655 Other lineage4.3.3 None
ERR4817780 Other lineage4.7 None
ERR4818988 Other lineage1 None
ERR4818691 Other lineage4.8 None
ERR4817826 RR-TB lineage4.5 None
ERR4816425 Other lineage2.2.2 None
ERR4817822 Other lineage4.6 None
ERR4818714 Other lineage4.8 None
ERR4817874 Other lineage3 None
ERR4819002 HR-TB lineage4.8 None
ERR4817917 Other lineage2.2.1 None
ERR4819007 Other lineage2.2.1 None
ERR4819011 Other lineage3.1.2.1 None
ERR4818752 Other lineage3 None
ERR2510831 Other lineage4.3.3 None
ERR4818064 Other lineage4.8 None
ERR4818776 Other lineage2.2.1 None
ERR4819017 RR-TB lineage3 None
ERR4818787 MDR-TB lineage6 None
ERR4818785 RR-TB lineage4.1.2.1 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818126 RR-TB lineage1 None
ERR4818810 Other lineage2.2.1 None
ERR2513223 Other lineage4.1.2.1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4818831 Other lineage3 None
ERR4818190 Other lineage4.8 None
ERR4818237 Other lineage4.3.3 None
ERR4818272 Other lineage4.3.2 None
ERR4818176 Other lineage4.1.2.1 None
ERR4818173 Other lineage2.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR2513231 RR-TB lineage4.3.4.2 None
ERR4818274 Other lineage4 None
ERR4818313 Other lineage2.2.1 None
ERR4818355 Other lineage3 None
ERR4818370 Other lineage4.1.1 None
ERR4818930 Other lineage4.1.2.1 None
ERR4818925 Other lineage1.2.1.2.1 None
ERR4818393 RR-TB lineage3 None
ERR4818407 Other lineage4.3.2 None
ERR4818436 Other lineage4.8 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4818570 Other lineage4.3.3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR4818565 Other lineage4.8 None
SRR5007165 MDR-TB lineage3 None
ERR4819087 Other lineage4.3.3 None
SRR5007168 RR-TB lineage4.9 None
ERR4817554 Other lineage1.1.1 None
ERR2512846 Sensitive lineage4.1.2.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR4817584 MDR-TB lineage3 None
ERR4817569 Other lineage4.3.4.1 None
ERR4818977 RR-TB lineage4.1.2.1 None
ERR4819096 Other lineage4.4.1.1 None
ERR4820256 Other lineage2.2.1 None
ERR4819131 Other lineage4 None
ERR2513681 Other lineage1.1.2 None
ERR4820717 Other lineage1.1.3 None
ERR4820720 Other lineage4.1.2.1 None
ERR4819198 Other lineage2.2.1 None
ERR4819140 Other lineage4.1.2.1 None
ERR4819192 Other lineage3 None
ERR4819305 RR-TB lineage4.9 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR4819287 Other lineage1.1.3.3 None
ERR4819217 Other lineage1.2.2.2 None
ERR4819224 Other lineage1.2.1.2.1 None
ERR4820265 Other lineage4.1.2.1 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819307 RR-TB lineage4 None
ERR4820729 Other lineage2.2.1 None
ERR4819329 Sensitive lineage4.6.2.2 None
SRR5153833 Other lineage2.2.1 None
ERR2514137 Pre-XDR-TB lineage2.2.1 None
ERR4820324 Other lineage4 None
ERR4819533 Other lineage1.1.2 None
ERR4819528 RR-TB lineage3 None
ERR4819525 Other lineage3 None
ERR4819456 Other lineage4.8 None
ERR4820350 Other lineage4.8 None
ERR4819491 Other lineage4.1.2.1 None
ERR2514267 MDR-TB lineage2.2.1.2 None
ERR4820746 RR-TB lineage3 None
ERR4819555 Other lineage4.8 None
ERR4820748 Other lineage3 None
ERR4819553 Other lineage4.1.4 None
ERR4820397 Other lineage4.9 None
ERR4819550 Other lineage3 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4819597 Other lineage2.2.1.1 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819766 Other lineage4.4.1.1 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4820777 Other lineage4.1.2.1 None
ERR4820478 Other lineage3.1.3 None
ERR4819784 Other lineage4.1.2.1 None
ERR4820484 Other lineage4.8 None
ERR4819765 Other lineage4.1 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4820503 Other lineage2.2.1 None
ERR4820572 Other lineage1.2.1.2.1 None
ERR4819830 Other lineage2.2.1 None
ERR4819948 Other lineage4.4.1.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4819872 HR-TB lineage4.4.1.1 None
ERR4820817 Other lineage4.1.2.1 None
ERR4820019 Other lineage4.3.4.2.1 None
SRR2024953 MDR-TB lineage2.2.1 cn
ERR2514968 Other lineage4.3.3 None
ERR4820026 Other lineage3 None
ERR2515032 Other lineage3 None
ERR4820193 Other lineage3 None
ERR4820107 RR-TB None
ERR4820151 RR-TB lineage4.8 None
ERR4820161 Other lineage3 None
ERR4820833 HR-TB None
ERR4820075 Other lineage4.1.2.1 None
ERR4821791 HR-TB lineage4.1.2.1 None
ERR4821769 Other lineage4.1.2.1 None
ERR4821775 Other lineage4 None
ERR4821007 RR-TB lineage1.2.2.2 None
ERR4821796 Other lineage4.1.1 None
ERR4820959 Other lineage4.1.2.1 None
ERR4821811 RR-TB lineage4.9 None
ERR4821011 Other lineage6 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR6045422 Other lineage4.3.1.1 None
ERR4821051 Other lineage1.2.1.2.1 None
SRR6045496 Other lineage6.1.3 None
SRR6045464 Other lineage4.1.1.3 None
ERR4821119 Other lineage4.4.1.1 None
SRR6045445 Other lineage4.3.1.1 None
ERR4821286 Other lineage4.8 None
ERR4821891 Other lineage4.8 None
ERR4821214 RR-TB None
ERR4821222 Other lineage4.3.2.1 None
ERR4821915 RR-TB lineage4.9 None
ERR4821245 Other lineage4.1.2.1 None
ERR4821310 Other lineage5 None
ERR4821288 Other lineage4.7 None
ERR4821981 Other lineage4.1.2.1 None
ERR4821334 RR-TB lineage4.1.3 None
ERR4821331 HR-TB lineage4.8 None
ERR4821325 Other lineage3 None
ERR4821530 HR-TB lineage4.3.4.1 None
ERR4821341 Other lineage4.3.4.1 None
ERR4821408 Sensitive lineage4.1.2 None
ERR4821417 Other lineage1.1.3.1 None
ERR4821432 HR-TB lineage4.1.3;lineage1.1.3.1 None
ERR4821526 Other lineage4.3.2 None
ERR4821373 HR-TB lineage4.1.2.1 None
ERR4821372 Other lineage4.1.2.1 None
ERR4821409 Other lineage4.8 None
ERR4822104 RR-TB lineage3 None
ERR4822114 Other lineage4.1.2.1 None
ERR4822138 Other lineage4.1.2.1 None
ERR4822189 Other lineage4.8 None
ERR4821572 Other lineage2.1 None
ERR4822222 Other lineage3.1.2.2 None
ERR4821679 Other lineage4.3.3 None
ERR4821616 Other lineage1.1.3.1 None
ERR4821610 Other lineage4.3.2 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821773 Other La1.6 None
ERR4821712 HR-TB None
ERR4821704 MDR-TB lineage4.3.3 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045591 Other lineage4.1.2.1 None
SRR6045664 Other lineage4.2.1 None
SRR6045565 Other lineage4.6.2.2 None
SRR6045642 Other lineage3.1.2.2 None
SRR6044936 Other lineage4 None
SRR6044904 Other lineage3 None
SRR6045944 Other lineage4.1.2.1 None
SRR6045125 Other lineage1.1.2 None
SRR6045071 Other lineage4.3.1.1 None
SRR6045957 Other lineage4.9 None
SRR6044983 Other lineage3.1.1 None
SRR6046291 Other lineage3 None
SRR6046208 Other lineage4 None
SRR6045267 RR-TB lineage4 None
SRR6045312 Other lineage1.1.3.3 None
SRR6046250 Other lineage4.9 None
SRR6046275 Other lineage3.1.1 None
SRR6045158 Other lineage4.9 None
SRR6045289 Other None
SRR6045424 Other lineage1.1.2 None
SRR6046246 Other lineage3 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046359 Other lineage4.7 None
SRR6046442 Other lineage3 None
SRR6046607 Other lineage3 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046815 Other lineage3 None
SRR6785282 Other lineage4.3.3 None
SRR6046860 Other lineage4.4.1.1 None
ERR4814905 Sensitive lineage4.8 gb
ERR4814994 HR-TB lineage2.2.1 gb
SRR6797751 MDR-TB lineage2.2.1 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR7131030 Other lineage4.1.2.1 None
ERR4819699 HR-TB lineage4.6.2.2 gb
ERR4815427 HR-TB lineage3.1 gb
SRR7131109 Pre-XDR-TB lineage4.8 None
SRR7131050 MDR-TB lineage4.3.3 None
SRR7131182 Other lineage4.1.2.1 None
ERR11465830 Sensitive lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR037234 Sensitive lineage4.9 None
ERR323061 Sensitive lineage4.9 None
ERR10796562 Other lineage4.3.4.1 None
ERR4818538 Sensitive lineage3 gb
ERR4820188 Other lineage3 gb
ERR10796558 Sensitive lineage4 None
ERR4819175 Other lineage4.1.1.3 gb
ERR10796563 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
ERR10796578 Other lineage2.2.1 None
ERR10796565 RR-TB lineage4.9 None
ERR10796576 RR-TB lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796597 Other lineage4 None
ERR10796593 RR-TB lineage4 None
ERR10796599 Other lineage4 None
ERR10796598 RR-TB lineage4.9 None
ERR10796627 Other lineage4 None
ERR10796615 Other lineage4 None
ERR10796620 Other lineage4.1.1 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796632 Other lineage4.3.3 None
ERR4822085 Other lineage4.8 gb
ERR10796635 Other lineage4 None
ERR11465490 Sensitive lineage4.1.2.1 None
ERR4820798 Other lineage3.1.2.1 gb
ERR4821812 Sensitive lineage4.8 gb
ERR11465829 Sensitive lineage4.9 None
ERR4821962 Other lineage4.1.1.3 gb
ERR4821958 Other lineage4.3.3 gb
ERR4822021 Other lineage4.8 gb
ERR4769495 Other La1.3 None
ERR4769418 Other La1.2 None
ERR4769419 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR6197024 RR-TB lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR10315465 MDR-TB lineage4.4.1.1 None
ERR6197040 Other lineage4.9 None
ERR6197044 RR-TB lineage4.9 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR036200 Sensitive lineage4.1.2 None
ERR037535 Sensitive lineage4.3.4.2.1 None
ERR9117695 Other lineage4.1.2.1 None
ERR6197030 Other lineage4.9 None
ERR6197042 RR-TB lineage4.9 None
ERR037506 Sensitive lineage4.3.4.2.1 None
ERR9117740 Other lineage3.1.1 None
ERR9117747 HR-TB lineage4.8 None
ERR9117788 Other lineage3 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR10315558 Sensitive lineage2.2.1 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR1173385 Sensitive lineage4.9 None
SRR1181161 Other lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1183080 RR-TB lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR1196545 HR-TB lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR18002976 Other lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18909918 Other lineage2.2.1.1 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR21658550 Other lineage1.1.1 None
SRR22048377 Sensitive lineage4.8 None