EBG00000313339 - n.2042C>T
Drug resistance types
168 Sensitive
83 RR-TB
45 HR-TB
74 MDR-TB
35 Pre-XDR-TB
2 XDR-TB
248 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 90 |
| lineage4.9 | 181 |
| lineage3.1.1 | 9 |
| lineage2.2.2 | 14 |
| lineage4.2.1 | 15 |
| lineage1.2.1.1 | 2 |
| lineage4.1.2 | 4 |
| lineage4.3.4.2.1 | 10 |
| lineage4.8 | 75 |
| lineage3.1.1;lineage4.3.2.1 | 1 |
| lineage1.2.2.2 | 6 |
| lineage4.3.4.1 | 3 |
| lineage4.1.1.1 | 7 |
| lineage4.3.2.1 | 5 |
| lineage3 | 32 |
| lineage4.8.1 | 5 |
| lineage4.3.3 | 16 |
| lineage3.1.2.2 | 2 |
| lineage2;lineage4.9 | 1 |
| lineage4.3.1.1 | 2 |
| lineage4.1.1.3.1 | 2 |
| lineage4.1.2.1 | 21 |
| lineage4.2.2.2 | 7 |
| lineage4.1.1.3 | 12 |
| lineage6.1.3 | 3 |
| lineage4.3.4.2 | 6 |
| lineage2.2.1;lineage4 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage5.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La2 | 1 |
| lineage1.1.2 | 4 |
| lineage2.2.1.2 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4 | 7 |
| lineage4.3 | 2 |
| lineage4.4.1.1 | 10 |
| lineage4.7 | 5 |
| La1.3 | 3 |
| lineage4.6.5 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.4.2 | 4 |
| La1.2.BCG;lineage4.9 | 6 |
| lineage3.1.2.1 | 3 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.1.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1.1 | 6 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.9.1 | 2 |
| lineage6.1.2 | 1 |
| lineage4.4 | 1 |
| lineage1.1.3.1 | 2 |
| La3;lineage4.9 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.4.1;lineage4.9 | 3 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.5 | 2 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage4.4.1.1.1 | 6 |
| lineage5.1 | 1 |
| 3 | |
| lineage4.6 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| La1.6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage3;lineage4 | 2 |
| lineage4.1.3 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| La1.2.BCG | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage3.1.2 | 1 |
| La1.8.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.2.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 2 |
| La1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage3.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 655 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045832 | Other | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR1173848 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR9971223 | Other | lineage2.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR6982078 | Sensitive | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR502483 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR7755657 | Other | lineage4.8 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR245795 | Sensitive | lineage3.1.1;lineage4.3.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR3105736 | Sensitive | lineage1.2.2.2 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR7070223 | HR-TB | lineage3 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR7443736 | Sensitive | lineage4.9 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR7444074 | Sensitive | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR7443725 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR6046839 | Other | lineage4.9 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR019855 | Other | lineage3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR6046210 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR3675552 | Other | lineage4.9 | None | SRR6046117 | Other | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR7069518 | Other | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR7070080 | Pre-XDR-TB | lineage3 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR2513259 | Other | lineage3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR11465776 | Sensitive | lineage4.1.1.3 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR18003038 | Other | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR1140774 | Sensitive | lineage5.1.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR2228838 | Other | lineage4.8 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR978762 | Other | lineage4.8 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR502482 | Sensitive | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR978748 | Other | lineage4.8 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR15276982 | XDR-TB | lineage3 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR5341460 | Other | lineage3 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR1140785 | Sensitive | lineage1.1.2 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR7443752 | Sensitive | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR7443722 | Sensitive | lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | SRR18003027 | Other | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465301 | Other | lineage4.3.4.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR7068888 | Sensitive | lineage2.2.1.2 | None | DRR184629 | Other | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR7443734 | Sensitive | lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR7443726 | Sensitive | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | SRR7444102 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR6257067 | HR-TB | lineage4.2.1 | None | ERR10796580 | Other | lineage4 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR2851360 | Sensitive | lineage4.7 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | ERR4769552 | Sensitive | La1.3 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR978747 | Other | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR2228900 | Other | lineage4.8 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR867566 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR6044904 | Other | lineage3 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR10796591 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR978751 | Other | lineage4.8 | None | ERR4818904 | Other | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR7504773 | Sensitive | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | SRR11972300 | MDR-TB | lineage2.2.1 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR6397155 | HR-TB | lineage3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR11080837 | Pre-XDR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | SRR7443741 | Sensitive | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR6982328 | Sensitive | lineage3.1.1 | None | ERR2229436 | Other | lineage4.8 | None | SRR3675565 | Other | lineage4 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | SRR7443743 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR5007163 | Other | lineage3;lineage4.9 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR10796634 | Other | lineage4.7 | None | SRR7443733 | Sensitive | lineage4.9 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR4769408 | Other | La1.3 | None | ERR10796581 | Other | lineage4.1.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR245810 | Sensitive | lineage4.9.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR1173515 | Sensitive | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR3675389 | Other | lineage4.9 | None | SRR19304104 | Other | lineage4.8 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR560448 | HR-TB | La1.2.BCG;lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR911930 | Other | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR560441 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR7131251 | Other | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR3675509 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | SRR7069319 | Other | lineage4.5 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR11465626 | Sensitive | lineage4.3.4.2.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR036233 | Sensitive | lineage1.1.2;lineage4.3.4.1 | None | SRR18003049 | Other | lineage2.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR7443738 | Sensitive | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR911929 | Other | lineage4.8 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002961 | Other | lineage2.2.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR2229147 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR7443749 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR1140792 | HR-TB | lineage5.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR4796577 | HR-TB | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR6982075 | Sensitive | lineage4.9 | None | ERR10796560 | Other | lineage4.9 | None | ERR560438 | Other | lineage4.9 | None | ERR560449 | HR-TB | La1.2.BCG;lineage4.9 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR7443768 | Sensitive | lineage4.9 | None | SRR7443790 | Sensitive | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR6044936 | Other | lineage4.6 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR502492 | Sensitive | lineage4.9 | None | SRR22048536 | Other | lineage4.3.3 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10993951 | RR-TB | La1.6 | None | ERR978761 | Other | lineage4.8 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR7443757 | Sensitive | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR4820742 | Sensitive | lineage4.3.4.2.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR7070553 | Other | lineage3 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR13180204 | Other | lineage3 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR6045957 | Other | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR978752 | Other | lineage4.8 | None | ERR10796559 | Other | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR1049672 | Other | lineage3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR6982196 | Sensitive | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR18002976 | Other | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR6397161 | Other | lineage4.2.2.2 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR6046020 | Other | lineage3 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR978693 | Other | lineage4.8 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR7443737 | Sensitive | lineage4.9 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR7070329 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR10796596 | Other | lineage4.9 | None | SRR5818612 | Other | lineage4.2.2.2 | None | SRR6046802 | Other | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7086711 | HR-TB | La1.2.BCG | None | SRR7069137 | Other | lineage4.8 | None | SRR6046376 | Other | lineage3 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR1196545 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR736816 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR7069648 | Other | lineage4.6.2.2 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR11349153 | RR-TB | lineage4.1.1.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR978735 | Other | lineage4.8 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR867571 | Other | lineage4.9 | None | SRR7443730 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR7443723 | Sensitive | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR245846 | Sensitive | lineage2.2.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4769514 | Other | La1.3 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR11342695 | MDR-TB | lineage4.8 | None | SRR1173770 | Other | lineage4.9 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR1198990 | Other | lineage4.6.1.1 | ug | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR867521 | MDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR7444103 | Sensitive | lineage4.9 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR7443740 | Sensitive | lineage4.9 | None | SRR6044952 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR7069097 | Other | lineage3.1.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR7070351 | Sensitive | lineage3 | None | SRR7070602 | Other | lineage4.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR10796566 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR7443731 | Sensitive | lineage4.9 | None | SRR7444098 | Sensitive | lineage4.9 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR736831 | Other | lineage4.9 | None | SRR18002987 | Other | lineage2.2.1 | None | ERR10796577 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR7070144 | Other | lineage4.8 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4817069 | RR-TB | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR11342646 | HR-TB | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR7443732 | Sensitive | lineage4.9 | None | SRR7443751 | Sensitive | lineage4.9 | None | ERR1140766 | Sensitive | lineage1.1.2 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR978694 | Other | lineage4.8 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR7443727 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR7069839 | Other | lineage4.8 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820484 | Sensitive | lineage4.8 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR502485 | Sensitive | lineage4.9 | None | DRR188816 | Sensitive | lineage4.2.2 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | DRR034348 | Other | lineage2.2.1 | None | SRR7443735 | Sensitive | lineage4.9 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR7443769 | Sensitive | lineage4 | None | SRR7444084 | Sensitive | lineage4.9 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR19303899 | Other | lineage3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR7645971 | Other | lineage2.2.1 | None | ERR2229148 | Other | lineage4.8 | dk | SRR7443767 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | SRR19303907 | Other | lineage4.8 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR7443724 | Sensitive | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7645924 | Pre-XDR-TB | lineage4.2.1 | None | SRR6045778 | Other | lineage3.1 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR867544 | Other | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR7069314 | Other | lineage3 | None |
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