EBG00000313325 - n.862A>T
Drug resistance types
28 Sensitive
42 RR-TB
24 HR-TB
18 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
163 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 62 |
| lineage6.2.3 | 1 |
| lineage4.1.2.1 | 16 |
| lineage3 | 21 |
| lineage2.2.1 | 37 |
| lineage4.9 | 34 |
| lineage4.8.1 | 1 |
| lineage1.1.2 | 3 |
| lineage1.2.1.1 | 2 |
| lineage2.2.2 | 12 |
| lineage4.1.2 | 6 |
| lineage4.3.3 | 7 |
| lineage4.4.1.1 | 9 |
| lineage4.3.2 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.1.1.1 | 4 |
| lineage4.1.1.3 | 5 |
| lineage2.2.1.1 | 3 |
| lineage4.3.2.1 | 1 |
| lineage1.2.2 | 2 |
| lineage4.5 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage3;lineage4.9 | 2 |
| lineage4.3.4.1 | 4 |
| lineage4.4.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| 1 | |
| lineage3.1.2.1 | 4 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1 | 2 |
| lineage4.6 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage3;lineage4 | 2 |
| lineage4.2.2.2 | 1 |
| lineage3.1.1 | 2 |
| lineage5 | 2 |
| lineage3.1.3;lineage4.9 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.2.2 | 1 |
| La1.6 | 1 |
| lineage4 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.3.4;lineage4.9 | 1 |
| lineage4.3.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage6.1.2 | 1 |
| lineage2.2.1;lineage2.2.2 | 2 |
| lineage4.7 | 1 |
| La1.8.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.6.5 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.3;lineage1.2.2.2 | 1 |
| lineage1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 287 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR978757 | RR-TB | lineage4.8 | None | ERR2027253 | Other | lineage6.2.3 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR4818977 | Other | lineage4.1.2.1 | None | ERR4820746 | Other | lineage3 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | ERR4815268 | Sensitive | lineage4.8 | None | SRR5818389 | Other | lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR2229733 | Other | lineage4.8 | dk | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR10796565 | Other | lineage4.9 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR7070223 | HR-TB | lineage3 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4821331 | HR-TB | lineage4.8 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR1013577 | HR-TB | lineage2.2.2 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR6046852 | MDR-TB | lineage3 | None | ERR019855 | Other | lineage3 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR4819872 | HR-TB | lineage4.4.1.1 | None | ERR4819307 | Other | lineage4.3.2 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5818460 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | ERR2228838 | Other | lineage4.8 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR10796623 | Other | lineage4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | ERR978748 | Other | lineage4.8 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR2512606 | HR-TB | lineage3 | None | SRR7070479 | Other | lineage4.1.2 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR7070329 | Other | lineage3 | None | SRR6045125 | Other | lineage1.1.2 | None | ERR4821245 | Other | lineage4.1.2.1 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2229541 | Other | lineage4.8 | None | ERR4818988 | Other | lineage1.2.2 | None | ERR2228899 | Other | lineage4.8 | None | ERR2228900 | Other | lineage4.8 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | ERR10796554 | Sensitive | lineage4.1.2 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR911929 | Other | lineage4.8 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4818785 | Sensitive | lineage4.1.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4816510 | Other | lineage4.1.2.1 | None | SRR5818408 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4816756 | Other | lineage2.2.1;lineage4 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5818469 | Other | lineage4.9 | None | ERR2514692 | Other | None | ERR978734 | RR-TB | lineage4.8 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | ERR978694 | Other | lineage4.8 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR4820151 | Other | lineage4.8 | None | SRR6044936 | Other | lineage4.6 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR5818404 | Other | lineage4.9 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR978761 | Other | lineage4.8 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4822104 | Other | lineage3;lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4814362 | Other | lineage4.8 | None | ERR2515055 | Sensitive | lineage3 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR18913750 | Other | lineage2.2.1 | None | ERR978756 | Other | lineage4.8 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4820266 | Sensitive | lineage3 | None | ERR978752 | Other | lineage4.8 | None | SRR5818400 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR4818259 | RR-TB | lineage4.1.1.1 | None | ERR4821310 | Other | lineage5 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR5818399 | Sensitive | lineage4.9 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR6964650 | Sensitive | lineage3 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR5818458 | Other | lineage4.9 | None | ERR4817131 | Other | lineage3.1.3;lineage4.9 | None | ERR4816967 | Other | lineage5 | None | ERR978693 | Other | lineage4.8 | None | SRR5818426 | Other | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR911930 | Other | lineage4.8 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4816425 | Other | lineage2.2.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR29539397 | MDR-TB | lineage2.2.1 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR18003027 | Other | lineage2.2.1 | None | ERR10796596 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796582 | Other | lineage4.3.4.1 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | SRR18213726 | Other | lineage3 | None | ERR4819528 | RR-TB | lineage3 | None | SRR5818437 | RR-TB | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR6044904 | Other | lineage3 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR10614047 | Sensitive | lineage4.9 | None | ERR4818522 | Other | lineage3 | None | ERR4814748 | Other | lineage4.8 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | ERR4821773 | Other | La1.6 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4819329 | Sensitive | lineage4.6.2.2 | None | ERR10796577 | Other | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR10796635 | Other | lineage4.8 | None | ERR017781 | Other | lineage3 | None | ERR4814312 | Other | lineage4 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | ERR867544 | Other | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | ERR978751 | Other | lineage4.8 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SAMN02360577 | HR-TB | lineage3 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4820324 | Other | lineage4 | None | ERR4821409 | Other | lineage4.8 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR2228910 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818414 | Other | lineage4.9 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR6046815 | Other | lineage3 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR2229436 | Other | lineage4.8 | None | ERR10796575 | Other | lineage4.3.4;lineage4.9 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR5818394 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | ERR4815923 | Sensitive | lineage4.8 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR1173421 | Other | lineage4.9 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR4828879 | HR-TB | lineage3 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR4815901 | Other | lineage2.2.2 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR2851359 | Other | lineage4.9 | None | SRR19304094 | Other | lineage6.1.2 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR5818445 | Other | lineage4.9 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4816667 | Other | lineage2.2.2 | None | ERR2514834 | Sensitive | lineage4.7 | None | SRR7236134 | Other | La1.8.1 | None | SRR6046246 | Other | lineage3 | None | ERR2228815 | Other | lineage4.8 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814714 | Other | lineage3 | None | ERR4821334 | Other | lineage4.1.3 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR9117788 | Other | lineage3 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR2229366 | Other | lineage4.8 | None | ERR4815909 | Other | lineage4.8 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR978747 | Other | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819217 | Other | La1.3;lineage1.2.2.2 | None | SRR1048968 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR2229147 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR2228813 | Other | lineage4.8 | None | ERR10796598 | Other | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | DRR034348 | Other | lineage2.2.1 | None | ERR2229811 | Other | lineage4.8 | dk | ERR978754 | RR-TB | lineage4.8 | None | SRR1173833 | Other | lineage4.9 | None | ERR4818507 | Other | lineage4.1.2.1 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR10796636 | Other | lineage4.1.2.1 | None |
|---|
