EBG00000313339 - n.1803A>G
Drug resistance types
68 Sensitive
7 RR-TB
93 HR-TB
20 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
89 Other
lineage Counts
| lineage | Count |
|---|---|
| 52 | |
| lineage4 | 44 |
| lineage4.9 | 100 |
| La1.3 | 7 |
| La1.2 | 4 |
| lineage4.9;La1.3 | 2 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 14 |
| lineage4.1.2.1;lineage1.1.2 | 2 |
| lineage4.1.2.1 | 5 |
| lineage2.2 | 6 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.5 | 1 |
| lineage6 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3 | 9 |
| lineage2.2.2 | 1 |
| lineage4.8 | 3 |
| lineage4.6.1.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| La1.8.1 | 7 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage4.4.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.4 | 1 |
| lineage4.2.1 | 1 |
| lineage4.8.1 | 1 |
| La1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 288 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769421 | Other | La1.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769427 | Other | La1.2 | None | ERR4769516 | Other | La1.3 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769503 | Other | La1.2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4769551 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR4798926 | MDR-TB | lineage4.1.2.1;lineage1.1.2 | in | ERR4797875 | MDR-TB | lineage4.1.2.1 | in | ERR4798823 | HR-TB | lineage4 | None | ERR4798587 | MDR-TB | lineage4.1.2.1 | in | ERR4798952 | MDR-TB | lineage4.1.2.1;lineage1.1.2 | in | ERR4799455 | MDR-TB | lineage4.1.2.1 | in | ERR4799025 | Pre-XDR-TB | None | ERR4800519 | MDR-TB | lineage4.1.2.1 | in | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800197 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR736875 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR970441 | RR-TB | lineage2.2.1.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR13180204 | Sensitive | lineage3 | None | SRR14782405 | HR-TB | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR2100537 | Sensitive | lineage3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR2100532 | Sensitive | lineage3 | None | SRR21657656 | Sensitive | lineage1.2.1.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692864 | Other | lineage4.9 | None | SRR8692868 | Sensitive | lineage4.9 | None | SRR8692854 | Other | lineage4.9 | None | SRR8692897 | Other | lineage4.9 | None | SRR8692885 | Other | lineage4.9 | None | SRR8692898 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692771 | Other | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692828 | Other | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692852 | Other | lineage4.9 | None | SRR8692855 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692878 | Other | lineage4.9 | None | SRR8692853 | Sensitive | lineage4.9 | None | SRR8692775 | Other | lineage4.9 | None | SRR8692832 | Other | lineage4.9 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692831 | Other | lineage4.9 | None | SRR8692888 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR8692899 | Other | lineage4.9 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR4815310 | Other | None | ERR4814639 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR4815550 | Other | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR181887 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212034 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2245418 | Sensitive | lineage3.1.1 | no | ERR228175 | Sensitive | lineage3 | None | ERR228180 | Sensitive | lineage3 | None | SRR4035796 | Other | lineage4.1.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819051 | Other | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR1035138 | MDR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819910 | Other | lineage4.9 | None | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341313 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341315 | Sensitive | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6046492 | Other | None | SRR6046555 | Sensitive | lineage3.1.1 | gb | SRR6046878 | HR-TB | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR323045 | HR-TB | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR8217918 | HR-TB | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR1023525 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1063859 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439441 | Other | La1.8.1 | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797015 | HR-TB | None | ERR3797004 | Other | La1.8.1 | None | ERR3797019 | Other | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797067 | Other | La1.8.1 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797086 | Other | lineage4.9 | None |
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