Rv3596c - c.10C>A


Drug resistance types
28 Sensitive 2 RR-TB 59 HR-TB 11 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 68 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9 3
M.canetti;lineage4.9;lineage9 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.9 9
lineage2.2 3
lineage4.9 82
La1.7;lineage4.9 1
La2;lineage4.9 1
lineage3 1
lineage2.2.1 7
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 3
lineage4.1.2.1 1
lineage4.9;lineage6.3 3
La2;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4.9 1
La3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
6
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.2 2
La3;M.canetti;lineage2.2.1 1
lineage4 2
lineage4.6.3;lineage4.9 1
lineage4.9;lineage7 4
La3;lineage4.9 3
lineage4.9;lineage9 2
lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.1 1
lineage4.3.4.2.1 1
lineage2.1 1
La1;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1;lineage4.1.2.1 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 2
lineage4.3.1;lineage4.9;lineage6 1
lineage1;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 1
M.canetti;lineage1 1
La1.7.1;lineage4.9 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage3.1.2.1;lineage3.1.2.2 1
spoligotype Counts
spoligotype Count
None 171
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR27450312 Other lineage3 None
ERR702405 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816585 Other lineage2.2 None
SRR5341300 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4815441 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR108471 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR1184381 MDR-TB None
ERR4814352 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR6045053 Other lineage4 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1165628 Other La3;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR5341330 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR5341461 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR1165699 Other lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4816478 HR-TB lineage4 None
ERR176643 Other La3;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1172234 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR1183111 HR-TB lineage4.9 None
ERR176740 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR779852 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR234659 Other None
ERR176778 HR-TB lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1184372 MDR-TB None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6046382 Sensitive lineage2.2.1 None
SRR1196566 Other lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR387051 Other lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1196494 MDR-TB None
SRR1169249 Other lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR7535086 Other None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR212138 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
ERR971389 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323085 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR987722 MDR-TB None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR926157 Sensitive lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1181403 Other lineage4.9 None