Rv0639 - c.561G>C


Drug resistance types
14 Sensitive 10 RR-TB 64 HR-TB 20 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 85 Other
lineage Counts
lineage Count
lineage4.9 65
La1.6;La3;lineage4.9 2
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 3
lineage4.6.1.1 1
lineage2.1;lineage4.9 12
M.canetti;lineage4.9 3
lineage4 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.9;lineage6.1.3 1
lineage2.1;lineage4.9;lineage6.3 9
La1.7;M.canetti;lineage4.9 1
lineage1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.6.2.2 2
La1.7;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La2;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage5.2 2
lineage2.2.1.2 1
lineage2.1 3
La3;lineage2.1;lineage4.9;lineage6.3 4
La3 2
lineage4.4.1.2 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2 4
6
M.canetti;lineage2.2 2
La3;lineage4.8 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 2
La3;lineage4.9 4
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8 1
lineage4.9;lineage9 2
La3;lineage4.3.4 1
La1.7.1;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2 1
lineage2.2.1 7
lineage2.2.1;lineage4.9 1
lineage3 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.3.4.2.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.1 1
lineage4.3.2;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage4.3.2.1 1
lineage1.1.1 1
lineage4.9;lineage7 1
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
lineage4.6.3;lineage4.9 1
lineage4.5 1
La1.2.BCG 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.X-unk4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 198
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR387051 RR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR926157 Other lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4769521 RR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR1173400 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR1180355 Sensitive lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4769452 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR3283018 HR-TB lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1034634 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1180410 Sensitive lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20970016 Other lineage2.2 None
ERR971389 Other lineage4.9 None
ERR9786604 Other None
SRR3675236 Other None
SRR1180406 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR363449 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR926156 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046133 HR-TB lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR6045706 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR12708392 Other lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR6359082 Other lineage4.9 None
SRR6046594 Other lineage4.9 None
ERR926155 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR161037 HR-TB lineage4.9 None
SRR1184381 MDR-TB None
ERR987722 MDR-TB None
ERR4407463 HR-TB None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR1180300 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR13423649 Other lineage2.2.1 None
SRR6046046 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
ERR702406 Other lineage2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR990545 RR-TB lineage3 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR181887 Other lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR3283032 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1183054 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR4817731 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR3283042 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR14066533 RR-TB lineage1.1.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1180137 RR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1180413 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR7821163 Other lineage2.2.1 None
ERR4819422 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR181824 MDR-TB lineage4.9 None
SRR6045053 Other lineage4 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR234659 HR-TB None
ERR752229 Other lineage4.5 None
ERR4798262 HR-TB La1.2.BCG None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR5341330 Other lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR926165 Other lineage4.9 None