lineage | Count |
---|---|
25 | |
lineage3 | 3 |
lineage2.2.1 | 9 |
La1.2 | 1 |
lineage2.2 | 3 |
lineage4.8 | 2 |
lineage4 | 32 |
lineage4.6.1.1 | 2 |
lineage4.5 | 1 |
lineage1.1.2 | 2 |
lineage2.2.1.2 | 2 |
lineage7;lineage2.2.1.2 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.2.2.2 | 2 |
lineage4.9 | 7 |
lineage4.2.2 | 1 |
lineage4.1 | 1 |
lineage3.1.1 | 2 |
lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 100 |
ID | Drug resistance | Lineage | Country iso2 | ERR4769452 | HR-TB | None | ERR400529 | Other | lineage3 | None | ERR4423531 | MDR-TB | lineage2.2.1 | None | ERR4769427 | Other | La1.2 | None | ERR4769450 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR9891961 | HR-TB | lineage4.8 | None | ERR6358979 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR4811493 | HR-TB | None | ERR5863853 | MDR-TB | lineage2.2.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR7902631 | Sensitive | lineage1.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR11050182 | HR-TB | lineage3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR14782405 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675488 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR9588015 | MDR-TB | lineage4.4.1.1 | None | ERR4814437 | Other | lineage4.1.2.1 | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | ERR2446520 | Sensitive | lineage4.2.2.2 | None | SRR3675270 | HR-TB | None | ERR2229536 | Sensitive | lineage4.8 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4817275 | Other | lineage4.2.2 | None | ERR2446566 | Other | lineage4.1 | None | SRR5341387 | Other | lineage4 | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341453 | Sensitive | None | SRR5341456 | Other | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR2514655 | Sensitive | lineage3 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341366 | Sensitive | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341469 | Other | lineage4 | None | ERR4821814 | Sensitive | lineage2.2.1 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045450 | Other | lineage4.9 | None | ERR2517618 | Sensitive | lineage4.2.2.2 | None | SRR5535933 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6045399 | Other | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | ERR4830353 | Other | None | ERR4831117 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6982474 | Sensitive | lineage3.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6982260 | Sensitive | lineage3.1.1 | None | ERR4831722 | HR-TB | lineage2.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | SRR857283 | MDR-TB | lineage4.3.3 | None | ERR323108 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR3797047 | HR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3283055 | HR-TB | None |
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