Rv3596c - c.1702_1704delAACinsGG
Drug resistance types
4 Sensitive
5 RR-TB
20 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.9;lineage7 | 4 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.9 | 32 |
| M.canetti;lineage1 | 1 |
| lineage4.1.2.1 | 4 |
| La3;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1 | 4 |
| La1.7;lineage4.9 | 2 |
| lineage4 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.8 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2 | 3 |
| La1.2;La1.8.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.9;lineage9 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.4.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 76 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6045548 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | SRR7236330 | Other | La1.8.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR10808730 | Other | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR6046878 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR4799025 | Other | lineage4.8 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR3675582 | Other | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR5341330 | Other | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4816322 | Other | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR2446566 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR752229 | Other | lineage4.5 | None |
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