Rv3601c - c.45G>C
Drug resistance types
5 Sensitive
1 RR-TB
123 HR-TB
8 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| 131 | |
| lineage4.9 | 5 |
| lineage4 | 9 |
| lineage2.2.1 | 6 |
| lineage4.1.2.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage3.1 | 2 |
| lineage2.2 | 4 |
| La2 | 1 |
| lineage3.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| La1 | 1 |
| lineage3 | 2 |
| lineage4.3.4 | 1 |
| lineage4.3.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 180 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1035138 | MDR-TB | None | SRR5341456 | Other | None | SRR5341333 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341302 | HR-TB | None | ERR2693231 | Other | None | SRR6045952 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | ERR278594 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046397 | Other | None | SRR6046514 | HR-TB | None | ERR4830353 | Other | None | SRR6325444 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | ERR323036 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831117 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR323043 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323041 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR323063 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR1034652 | Other | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283017 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR387051 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR6358837 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811493 | HR-TB | None | ERR736839 | Other | None | ERR702406 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6358991 | HR-TB | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR8976043 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736874 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR987722 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1172951 | Other | None | SRR1172310 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172728 | MDR-TB | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1174897 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1196768 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR19304036 | HR-TB | None | SRR12416824 | HR-TB | None | SRR19303884 | HR-TB | None | SRR17832802 | HR-TB | lineage3 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | ERR176778 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | ERR161033 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | SRR3675221 | HR-TB | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675383 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675545 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675510 | Other | None | ERR212034 | HR-TB | None | ERR212033 | HR-TB | None | ERR212001 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675558 | HR-TB | None | ERR212123 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816656 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4818929 | HR-TB | None | ERR234659 | HR-TB | None |
|---|
