Rv0668 - c.3087C>G
Drug resistance types
66 Sensitive
1 RR-TB
61 HR-TB
6 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
65 Other
lineage Counts
| lineage | Count |
|---|---|
| 65 | |
| lineage4.9 | 34 |
| lineage2.2.1 | 13 |
| lineage4.9.1 | 1 |
| lineage4.3.4.1 | 1 |
| La2 | 1 |
| lineage4.8.1 | 1 |
| lineage4.7 | 2 |
| lineage4.4.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4 | 35 |
| La1 | 2 |
| lineage4.4.1.1;lineage1.2.2.1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage6.1.1 | 2 |
| La1.2 | 1 |
| La1.3 | 1 |
| lineage3 | 8 |
| lineage3.1.2 | 1 |
| lineage2.2 | 4 |
| lineage4.5 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| La1.4 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.3.4 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 205 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046492 | Other | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | ERR4831638 | Sensitive | None | SRR6046644 | HR-TB | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR4831117 | HR-TB | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | SRR7496471 | Sensitive | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | SRR7496523 | Other | lineage4.7 | None | DRR188519 | Other | lineage4.4.2 | None | SRR7535086 | Other | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR067712 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR3283010 | Other | La1 | None | ERR1063855 | Other | lineage4 | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283031 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR363456 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797061 | Other | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797064 | Sensitive | None | ERR387051 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769516 | Other | La1.3 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4796577 | MDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR736837 | Other | lineage4.9 | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR987722 | HR-TB | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1174897 | HR-TB | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1172310 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR17658565 | Other | lineage3 | None | SRR17832802 | HR-TB | lineage3 | None | SRR20970016 | Other | lineage2.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR4815310 | Other | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4814639 | HR-TB | lineage4 | None | ERR181744 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675234 | Other | None | ERR212001 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176740 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675456 | HR-TB | None | ERR2036900 | Sensitive | lineage4.7 | None | ERR4816322 | Other | lineage4.9 | None | SRR3675555 | HR-TB | None | ERR4815815 | Sensitive | lineage4 | None | ERR212123 | Other | None | SRR3675571 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR2446566 | Other | lineage4.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5341456 | Other | None | ERR6359082 | Other | lineage4.9 | None | ERR2693231 | Other | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR2693254 | Other | None | SRR5535933 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6044897 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6045217 | Other | lineage4 | None | SRR6045399 | Other | None |
|---|
