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SRA data
Rv0006
- c.1188A>G
Drug resistance types
43 Sensitive
16 RR-TB
107 HR-TB
52 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
94 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
71
M.canetti;lineage2.1;lineage4.9
24
lineage1.2.2.1
20
La3;M.canetti;lineage2.1;lineage4.9
12
La1.7;lineage4.9
9
lineage2.1;lineage4.9
8
lineage2.2.1
8
lineage4.1.2.1
7
M.canetti;lineage2.1;lineage4.9;lineage6.3
6
M.canetti;lineage4.9
6
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
314
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
DRR188519
Other
lineage4.4.2
None
ERR036223
Sensitive
lineage1.2.2.1
mw
ERR037469
Sensitive
lineage1.2.2.1;lineage4.3.4.2.1
mw
ERR037496
Sensitive
lineage1.2.2.1
mw
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1034634
HR-TB
lineage4.9
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1063839
MDR-TB
La2;lineage2.2
None
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