Rv0006 - c.1188A>G


Drug resistance types
48 Sensitive 3 RR-TB 152 HR-TB 12 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 73 Other
lineage Counts
lineage Count
lineage4.1.2.1 10
lineage4.4.2 1
lineage4 33
lineage1.2.2.1 18
lineage4.3.4.2.1;lineage1.2.2.1 1
130
lineage2.2 4
lineage4.9 33
La1 2
La1.8.1 4
lineage6.1.1 2
lineage4;lineage3.1 1
La1.2 1
lineage4.9;La1.3 1
lineage3 3
lineage3.1.2 1
lineage2.2.1 9
lineage4.6.1.1 1
lineage4.3.4 1
lineage4.3.2 1
lineage1.1.3.1 1
lineage4.6.2.2 3
lineage6 1
lineage4.8;lineage4.1 2
lineage6.3.1 1
lineage4.4.1.1 3
lineage2.2.1.2 2
La1.7.1 1
lineage4;lineage2.2 1
lineage4.1 3
lineage2.1 1
lineage4;lineage1.2.2.1 1
lineage1.1.2 1
lineage3.1.3 1
lineage4.8 2
lineage4;lineage1.1.2 1
lineage4.1.2 2
lineage4.1.1.2 1
lineage4.1.1 1
lineage4.1.1.3 2
lineage1.1 1
lineage3.1 2
La2 1
lineage4.3.4.2.1 1
spoligotype Counts
spoligotype Count
None 293
Geographic prevalence
Country level data for this variant is available for 21 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1023295 HR-TB lineage4.1.2.1 None
DRR188519 Other lineage4.4.2 None
ERR323107 Other lineage4 None
ERR036223 Sensitive lineage1.2.2.1 mw
ERR037469 Sensitive lineage4.3.4.2.1;lineage1.2.2.1 mw
ERR037496 Sensitive lineage1.2.2.1 mw
ERR067699 HR-TB lineage4 None
ERR1063857 HR-TB None
ERR1034634 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1063862 HR-TB None
ERR1063859 HR-TB None
ERR1063858 HR-TB None
ERR3283013 MDR-TB lineage4 None
ERR3283010 Other La1 None
ERR133825 Sensitive lineage4 None
ERR3283017 HR-TB None
ERR3283021 HR-TB None
ERR3283014 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283028 Other None
ERR3283024 Other None
ERR3283025 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3283040 HR-TB None
ERR3445501 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3445504 HR-TB None
ERR3468544 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3797016 HR-TB None
ERR3797014 Other None
ERR3797024 Other lineage4.9 None
ERR3797015 HR-TB None
ERR3797017 Other None
ERR3797047 HR-TB lineage4 None
ERR3797043 HR-TB None
ERR3797036 HR-TB None
ERR3797023 HR-TB La1.8.1 None
ERR3797081 Sensitive lineage4 None
ERR3797060 Other La1.8.1 None
ERR3797073 HR-TB La1.8.1 None
ERR3797044 Other None
ERR3797061 Other None
ERR3797063 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797083 HR-TB None
ERR3799304 Other lineage6.1.1 None
ERR3797086 Other lineage4.9 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR405209 Sensitive lineage4 None
ERR473332 Other lineage4 None
ERR4188350 HR-TB None
ERR4188247 HR-TB None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769450 HR-TB None
ERR4769452 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769474 HR-TB lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4769521 HR-TB None
ERR4796577 MDR-TB None
ERR4798504 Other lineage3 None
ERR4797588 MDR-TB lineage3 None
ERR4798262 HR-TB La1 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799025 Pre-XDR-TB None
ERR4798823 HR-TB lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR6358991 HR-TB None
ERR4810624 HR-TB lineage2.2 None
ERR6358755 Other lineage4.6.1.1 None
ERR6358837 HR-TB None
ERR6866547 Sensitive lineage4 None
ERR6359045 HR-TB None
ERR6866410 Sensitive None
ERR736817 HR-TB lineage4.3.4 None
ERR702406 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR736831 HR-TB lineage4.9 None
ERR736848 HR-TB None
ERR736835 HR-TB None
ERR736839 Other None
ERR9786421 Other lineage4.1.2.1 None
ERR736875 HR-TB lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
ERR779664 Sensitive lineage1.2.2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR736865 HR-TB None
ERR8976043 HR-TB None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119669 HR-TB None
ERR9787165 Other lineage6 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR9786604 Other None
ERR9786642 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
SRR10808805 Sensitive None
ERR9787139 Other lineage6.3.1 None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1172310 HR-TB None
SRR10809074 Sensitive lineage4 None
SRR1162740 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1183049 Other lineage2.2 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1174897 HR-TB None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1180137 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR13861322 Other lineage4.9 None
SRR12416824 HR-TB None
SRR13861261 Sensitive lineage4.9 None
SRR13837521 Sensitive lineage4.9 None
SRR13861146 Sensitive lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861329 Other lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR13861434 RR-TB lineage4.9 None
SRR13861571 RR-TB lineage4.9 None
SRR13861534 Other lineage4.9 None
SRR13861611 Sensitive lineage4.9 None
SRR13861646 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR13861663 Sensitive lineage4.9 None
SRR14782405 HR-TB None
SRR14801749 Sensitive None
SRR1640750 HR-TB None
SRR1791696 Other La1.8.1 None
SRR8692887 Other None
SRR19295647 Sensitive lineage4.9 None
SRR8692905 HR-TB None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692882 HR-TB lineage4.9 None
ERR176779 HR-TB None
ERR176778 HR-TB None
SRR3675464 HR-TB lineage4.1 None
ERR181744 HR-TB None
SRR6325445 HR-TB None
ERR1035239 HR-TB None
SRR3675488 HR-TB None
ERR190336 Sensitive lineage1.2.2.1 mw
SRR3675486 HR-TB None
SRR3675482 HR-TB None
ERR190337 Sensitive lineage1.2.2.1 mw
ERR161033 HR-TB None
SRR3675501 HR-TB None
ERR163963 Sensitive lineage1.2.2.1 mw
ERR4814639 HR-TB lineage4 None
SRR3675222 Other None
ERR181794 Sensitive lineage1.2.2.1 mw
SRR3675234 Other None
ERR182010 Sensitive lineage1.2.2.1 mw
SRR3675270 HR-TB None
ERR181824 HR-TB lineage4 None
ERR176453 Sensitive lineage1.2.2.1 mw
SRR3675280 HR-TB lineage4.9 None
ERR176637 Sensitive lineage1.2.2.1 mw
SRR3675284 HR-TB lineage4.9 None
ERR176651 HR-TB None
ERR181887 HR-TB None
ERR176751 HR-TB None
SRR3675383 HR-TB None
SRR3675456 HR-TB None
SRR3675510 Other None
SRR3675545 HR-TB None
ERR4817037 Other lineage4.9 None
ERR212034 HR-TB None
SRR5341422 HR-TB lineage2.1 None
ERR212096 Sensitive lineage1.2.2.1 mw
SRR3675555 HR-TB None
SRR3675558 HR-TB None
ERR212102 Sensitive lineage1.2.2.1 mw
ERR212138 HR-TB lineage4 None
ERR212125 HR-TB lineage4 None
ERR212107 Sensitive lineage4;lineage1.2.2.1 mw
ERR212123 Other None
ERR212121 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4816466 HR-TB None
ERR221569 Sensitive lineage1.2.2.1 mw
SRR7898221 MDR-TB lineage1.1.2 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4817667 HR-TB lineage4.8 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
SRR4035816 Sensitive lineage4.1.2 None
ERR2446566 Other lineage4.1 None
ERR4818252 Other lineage4.1.1.2 None
ERR2229143 Other lineage4.1.1 None
ERR245672 Sensitive lineage1.2.2.1 mw
ERR245751 Sensitive lineage1.2.2.1 mw
ERR245727 Sensitive lineage1.2.2.1 mw
ERR245739 Sensitive lineage1.2.2.1 mw
ERR245843 Sensitive lineage1.2.2.1 mw
SRR5341400 HR-TB lineage4 None
SRR5341373 HR-TB lineage4 None
SRR5341456 Other None
ERR2514327 HR-TB lineage4.8 None
ERR1035138 MDR-TB None
SRR5341432 HR-TB lineage4 None
ERR2515876 Sensitive lineage4.1.1.3 None
SRR5341293 HR-TB lineage4 None
ERR6359082 Other lineage4.9 None
SRR5341313 HR-TB None
SRR5341315 Sensitive None
ERR2693257 Other None
SRR5341330 HR-TB None
ERR2693239 HR-TB None
ERR2693254 Other None
ERR2693231 Other None
SRR5341470 HR-TB None
ERR4821053 Other lineage3 None
ERR2693230 Other None
ERR278594 HR-TB None
SRR5535933 HR-TB None
SRR6045519 HR-TB None
SRR5709967 MDR-TB lineage2.2.1 None
ERR2660539 Other lineage4.9 None
SRR6045555 HR-TB None
SRR6046133 HR-TB None
SRR6046141 Other lineage4.9 None
SRR6045892 Sensitive None
ERR2693232 Other lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044835 Sensitive lineage4 None
SRR6045217 Other lineage4 None
SRR6044890 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6045053 Other None
SRR6046046 Other None
SRR6046644 HR-TB None
SRR6045233 HR-TB None
SRR6046210 Other lineage4 None
SRR6046299 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
ERR2446563 Other lineage2.2.1 nl
ERR3275196 Other lineage2.2.1 nl
SRR6046492 Other None
SRR6046225 HR-TB None
SRR6325444 HR-TB None
SRR6046362 HR-TB None
SRR6046460 HR-TB None
SRR6325448 HR-TB None
SRR6046514 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6325447 HR-TB None
SRR6046878 HR-TB lineage4 None
ERR485006 HR-TB lineage4.9 None
SRR6325442 HR-TB None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR3077978 Other lineage1.1 None
ERR323037 HR-TB lineage4 None
ERR323034 HR-TB lineage3.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR294248 HR-TB None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6855952 Other lineage4.1.1.3 None
ERR502532 HR-TB None
ERR323036 HR-TB None
ERR502524 HR-TB La2 None
ERR323038 HR-TB None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
ERR323055 HR-TB None
ERR5311090 HR-TB None
SRR9970978 Sensitive lineage4.1.2 None
SRR8217918 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323039 HR-TB None
ERR323041 HR-TB None
ERR323043 HR-TB None
ERR323045 HR-TB None
ERR323063 HR-TB None
ERR323053 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323108 HR-TB lineage4 None