Rv2477c - c.699C>G
Drug resistance types
9 Sensitive
1 RR-TB
56 HR-TB
12 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
95 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.2 | 2 |
| lineage2.1;lineage4.9 | 7 |
| La1;lineage4.1.2 | 1 |
| lineage2.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.9 | 79 |
| lineage2.2 | 4 |
| 9 | |
| lineage2.1;lineage6.3 | 2 |
| lineage4.1.2.1 | 11 |
| La3;lineage4.8 | 1 |
| lineage6.3.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.8.1 | 1 |
| La3;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage4 | 3 |
| lineage4.1.3 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.6.2.2 | 3 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.1.1.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8 | 2 |
| lineage2.2.1 | 5 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage3 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.7 | 1 |
| La3;lineage1.1.2 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.2 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.3.2 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 175 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR9786671 | Other | None | ERR137286 | Other | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR11465604 | HR-TB | lineage4.8.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR926165 | Other | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045548 | Other | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR6046593 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7496472 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR3675221 | Other | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675246 | Other | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR3675457 | Other | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR5341467 | Other | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR7496509 | Other | None | SRR7535086 | Other | None | SRR18213713 | HR-TB | None | ERR4816999 | Other | None | ERR4797474 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR6046046 | Other | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4817735 | Other | lineage4.8 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR702406 | Other | lineage2.1 | None | ERR926156 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4799025 | Other | lineage4.8 | None | SRR6045347 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR11466499 | Other | lineage4.3.4.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR1063896 | HR-TB | None | ERR9786604 | Other | None | SRR6789626 | Other | None | SRR28351339 | MDR-TB | lineage4 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR3675270 | Other | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None |
|---|
