EBG00000313339 - n.157A>C
Drug resistance types
24 Sensitive
1 RR-TB
64 HR-TB
3 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 43 |
| lineage4;lineage3.1 | 1 |
| 33 | |
| lineage4 | 29 |
| lineage2.2.1 | 7 |
| lineage2.2 | 5 |
| lineage4.3.4 | 1 |
| lineage5.2 | 2 |
| lineage3 | 2 |
| lineage4.3.4.2 | 2 |
| lineage2.2.1.2 | 2 |
| La1.8.1 | 2 |
| lineage2.2.1.1 | 1 |
| La2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4;lineage2 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 148 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866807 | HR-TB | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736848 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR9786076 | Sensitive | lineage3 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9786774 | Sensitive | lineage4.3.4.2 | None | SRR10808805 | Sensitive | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR11462861 | Other | La1.8.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR13888750 | Other | La2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR21677859 | Sensitive | lineage4.1.1.3 | None | SRR20970016 | Other | lineage2.2 | None | SRR8692790 | RR-TB | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | SRR8692881 | Other | lineage4.9 | None | SRR8692893 | Other | lineage4.9 | None | SRR8692897 | Other | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692885 | Other | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692771 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692818 | Other | lineage4.9 | None | SRR8692825 | Other | lineage4.9 | None | SRR8692878 | Other | lineage4.9 | None | SRR8692894 | Other | lineage4.9 | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR8692791 | Other | lineage4.9 | None | SRR8692776 | Other | lineage4.9 | None | SRR8692832 | Other | lineage4.9 | None | SRR8692844 | Other | lineage4.9 | None | SRR8692867 | Other | lineage4.9 | None | SRR8692887 | Other | None | ERR176779 | HR-TB | None | SRR8692899 | Other | lineage4.9 | None | ERR176778 | HR-TB | None | ERR181887 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | ERR176651 | HR-TB | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816964 | Other | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR6045010 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | ERR2693227 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR5535933 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4811186 | Sensitive | lineage4.5 | cn | ERR323037 | HR-TB | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | ERR323045 | HR-TB | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR323107 | Other | lineage4 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR067712 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063857 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283021 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283025 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None |
|---|
