Rv0668 - c.924G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
110 Sensitive
5 RR-TB
50 HR-TB
40 MDR-TB
13 Pre-XDR-TB
1 XDR-TB
87 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 2 |
| lineage4.9 | 92 |
| lineage2.2.1 | 22 |
| lineage1.2.1.1 | 1 |
| lineage3 | 105 |
| lineage4.9;lineage9 | 1 |
| lineage3.1.3 | 1 |
| lineage4.4.2 | 1 |
| La3;lineage4.9 | 5 |
| lineage1;lineage4.9 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4 | 6 |
| lineage4.1.1.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1 | 4 |
| La1;lineage4.9 | 4 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.6.2.2 | 3 |
| 6 | |
| lineage2.2.1.2 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.9;lineage6.3 | 1 |
| La1.8.1 | 4 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2 | 2 |
| La2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.6.1 | 1 |
| lineage4.5 | 1 |
| lineage6.1.1 | 2 |
| lineage4.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage3;lineage4.5 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.1;lineage3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage3.1 | 1 |
| lineage4.8;lineage4.9 | 2 |
| La1.7;lineage4.9;lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 306 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR1169249 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR29096944 | Sensitive | lineage3 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR2513378 | Other | lineage3 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2446566 | Other | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR29096943 | Sensitive | lineage3.1.2.1 | None | SRR6045347 | Other | lineage4.9 | None | ERR13289934 | Sensitive | lineage3 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR13289928 | Sensitive | lineage3 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | SRR15014742 | MDR-TB | lineage3 | None | ERR4798053 | Sensitive | lineage3 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR13290636 | MDR-TB | lineage3 | None | ERR9896144 | Other | lineage3 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR25827407 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR13266694 | MDR-TB | lineage3 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR7535086 | Other | None | SRR28868444 | Sensitive | lineage3 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR230025 | Sensitive | lineage3 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR228150 | Sensitive | lineage3 | None | SRR29230669 | Sensitive | lineage3 | None | ERR4796555 | Pre-XDR-TB | lineage3 | in | SRR5341467 | Other | lineage4.9 | None | ERR4797720 | XDR-TB | lineage3 | in | ERR779852 | Sensitive | lineage4.9 | None | ERR4799067 | Sensitive | lineage3 | in | ERR4799242 | Sensitive | lineage3 | in | SRR6045892 | Sensitive | lineage4.9 | None | ERR4796870 | Sensitive | lineage3 | in | SRR29772800 | Pre-XDR-TB | lineage3 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR6397939 | Sensitive | lineage3 | ca | SRR28351339 | MDR-TB | lineage4 | None | ERR4829967 | MDR-TB | lineage3 | None | ERR4831083 | Sensitive | lineage3 | np | ERR4769497 | Other | La1;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4814868 | Sensitive | lineage3 | gb | ERR4816218 | HR-TB | lineage3 | gb | ERR4818391 | Sensitive | lineage3 | gb | ERR4820382 | Sensitive | lineage3 | gb | ERR4820500 | Sensitive | lineage3 | gb | ERR4820528 | Sensitive | lineage3 | gb | SRR17406772 | Sensitive | lineage3 | None | SRR28351588 | MDR-TB | lineage3 | None | SRR6046878 | Other | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR7236177 | Other | La1.8.1 | None | ERR176651 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR28045442 | HR-TB | lineage3 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR13266951 | Other | lineage3 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR176557 | Sensitive | lineage4.3.4.1 | None | ERR13289665 | Sensitive | lineage3 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR13266875 | MDR-TB | lineage3 | None | ERR294239 | Sensitive | lineage3 | None | ERR752229 | Other | lineage4.5 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786526 | Other | lineage4.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR29124316 | Other | lineage3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR751326 | Other | lineage4.9 | None | ERR11081288 | Sensitive | lineage3 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4800142 | Sensitive | lineage3 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR13290635 | MDR-TB | lineage3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR176751 | Other | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR2510519 | Pre-XDR-TB | lineage3 | pk | ERR3797046 | HR-TB | lineage4.9 | None | ERR2510477 | Pre-XDR-TB | lineage3 | pk | ERR4831511 | MDR-TB | lineage3 | pk | SRR14088394 | MDR-TB | lineage3 | None | ERR4798415 | Sensitive | lineage3 | in | ERR4798844 | Other | lineage3 | in | SRR1183111 | HR-TB | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR4800211 | MDR-TB | lineage3 | in | ERR4819843 | Sensitive | lineage3 | gb | ERR4798316 | RR-TB | lineage3 | in | ERR4798364 | Pre-XDR-TB | lineage3 | in | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR294230 | Sensitive | lineage3 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | SRR28044371 | Sensitive | lineage3 | None | ERR11252664 | Other | lineage2.2.1 | None | SRR6397332 | Sensitive | lineage3 | ca | ERR2514692 | Other | None | ERR987722 | MDR-TB | None | SRR5341387 | Other | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR1167081 | MDR-TB | lineage3 | None | SRR25827505 | Sensitive | lineage3 | None | SRR1166915 | MDR-TB | lineage3 | None | SRR1791725 | Other | La1.8.1 | None | ERR2514821 | Sensitive | lineage2.2.1 | None | SRR2100488 | Sensitive | lineage3 | None | SRR2100509 | Sensitive | lineage3 | None | SRR2100518 | Sensitive | lineage3 | None | SRR2100653 | Sensitive | lineage3 | None | SRR2101027 | Sensitive | lineage3 | None | SRR2101035 | Sensitive | lineage3 | None | ERR2517068 | MDR-TB | lineage3 | gb | ERR2516754 | MDR-TB | lineage3 | gb | ERR2513555 | Sensitive | lineage3 | gb | ERR2512781 | Sensitive | lineage3 | gb | SRR6045106 | Sensitive | lineage3 | gb | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR13266806 | HR-TB | lineage3;lineage4.5 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR22249462 | Sensitive | lineage3 | None | ERR137286 | Other | lineage4.9 | None | ERR4816802 | Sensitive | lineage3 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR4829128 | MDR-TB | lineage3 | pk | SRR5341455 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR1791747 | Other | La1.8.1 | None | ERR228159 | Sensitive | lineage3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR1035149 | RR-TB | lineage3 | None | ERR4798099 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR22251181 | Sensitive | lineage3 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR4796296 | Sensitive | lineage3 | None | SRR29440850 | Sensitive | lineage3 | None | ERR990545 | Other | lineage3 | None | ERR3273109 | HR-TB | lineage4 | None | SRR25827812 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | ERR11080874 | Sensitive | lineage3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12006550 | Sensitive | None | ERR7821163 | Other | lineage2.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5431730 | Other | La1.8.1 | None | SRR25827605 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR6964666 | MDR-TB | lineage3 | None | ERR2510490 | Pre-XDR-TB | lineage3 | pk | SRR28351442 | HR-TB | lineage3.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR4796837 | MDR-TB | lineage3 | in | ERR4797135 | Sensitive | lineage3 | in | ERR4799513 | HR-TB | lineage2.2 | None | ERR4796704 | Other | lineage3 | in | ERR736834 | Sensitive | lineage4.9 | None | ERR4800592 | HR-TB | lineage3 | in | ERR4798145 | HR-TB | lineage3 | in | ERR4798215 | Sensitive | lineage3 | in | ERR4798341 | Pre-XDR-TB | lineage3 | in | ERR13290637 | MDR-TB | lineage3 | None | SRR19428511 | Sensitive | lineage3 | None | SAMN02414979 | MDR-TB | lineage3 | se | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR11044665 | HR-TB | lineage3 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR28044395 | MDR-TB | lineage3 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR28045995 | Sensitive | lineage3 | None | ERR228125 | Sensitive | lineage3 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR4800143 | Sensitive | lineage3 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR1162815 | MDR-TB | lineage3 | None | SRR1181289 | Other | lineage2.2.1 | None | ERR4818611 | Sensitive | lineage3 | gb | ERR4819572 | HR-TB | lineage3 | gb | ERR4820184 | HR-TB | lineage3 | gb | ERR4821257 | Sensitive | lineage3 | gb | ERR4821252 | Sensitive | lineage3 | gb | SRR6045323 | Sensitive | lineage3 | gb | SRR6046750 | Sensitive | lineage3 | gb | SRR22424806 | MDR-TB | lineage3 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR1165399 | MDR-TB | lineage3 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR1063896 | Sensitive | None | SRR5535933 | Other | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None |
|---|
