SRR6046750
|
Sensitive
|
lineage3
|
gb
|
SRR25827505
|
Sensitive
|
lineage3
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR4800592
|
HR-TB
|
lineage3
|
in
|
SRR1180226
|
HR-TB
|
lineage4.9
|
None
|
SRR5431730
|
Other
|
La1.8.1
|
None
|
SRR28045995
|
Sensitive
|
lineage3
|
None
|
ERR228125
|
Sensitive
|
lineage3
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR1181289
|
Other
|
lineage2.2.1
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
ERR4796870
|
Sensitive
|
lineage3
|
in
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR4798215
|
Sensitive
|
lineage3
|
in
|
ERR4798316
|
RR-TB
|
lineage3
|
in
|
ERR4816218
|
HR-TB
|
lineage3
|
gb
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
ERR13266806
|
HR-TB
|
lineage3;lineage4.5
|
None
|
ERR4821252
|
Sensitive
|
lineage3
|
gb
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
ERR4797135
|
Sensitive
|
lineage3
|
in
|
ERR4818611
|
Sensitive
|
lineage3
|
gb
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR9787014
|
Other
|
lineage6.1.1
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
ERR2512781
|
Sensitive
|
lineage3
|
gb
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
ERR987729
|
HR-TB
|
lineage3.1.2.1;lineage3.1.2.2
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR4816802
|
Sensitive
|
lineage3
|
None
|
SRR2101027
|
Sensitive
|
lineage3
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
SRR28045442
|
HR-TB
|
lineage3
|
None
|
SRR28868444
|
Sensitive
|
lineage3
|
None
|
ERR4819572
|
HR-TB
|
lineage3
|
gb
|
ERR4831620
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29096943
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR5341455
|
Sensitive
|
lineage4.9
|
None
|
ERR2513555
|
Sensitive
|
lineage3
|
gb
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
SRR14088394
|
MDR-TB
|
lineage3
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
SRR29096944
|
Sensitive
|
lineage3
|
None
|
ERR9896144
|
Other
|
lineage3
|
None
|
ERR228159
|
Sensitive
|
lineage3
|
None
|
SRR6045106
|
Sensitive
|
lineage3
|
gb
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4796555
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR5341425
|
Other
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
ERR13290635
|
MDR-TB
|
lineage3
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
ERR4821655
|
HR-TB
|
lineage4.9
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
ERR4818252
|
Sensitive
|
lineage4.1.1.2
|
None
|
ERR13266875
|
MDR-TB
|
lineage3
|
None
|
ERR4796837
|
MDR-TB
|
lineage3
|
in
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
ERR4820500
|
Sensitive
|
lineage3
|
gb
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
ERR294239
|
Sensitive
|
lineage3
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
ERR4798053
|
Sensitive
|
lineage3
|
None
|
ERR4796296
|
Sensitive
|
lineage3
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
ERR11080874
|
Sensitive
|
lineage3
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
SRR25827407
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
ERR2516754
|
MDR-TB
|
lineage3
|
gb
|
SRR14802079
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
ERR4831083
|
Sensitive
|
lineage3
|
np
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR13290637
|
MDR-TB
|
lineage3
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
ERR228150
|
Sensitive
|
lineage3
|
None
|
ERR3799304
|
Other
|
lineage6.1.1
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
ERR4798364
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
ERR7821163
|
Other
|
lineage2.2.1
|
None
|
ERR2517068
|
MDR-TB
|
lineage3
|
gb
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
ERR2513121
|
Sensitive
|
lineage3.1.3
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR4814868
|
Sensitive
|
lineage3
|
gb
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR9786843
|
Other
|
|
None
|
SRR28044395
|
MDR-TB
|
lineage3
|
None
|
ERR11252664
|
Other
|
lineage2.2.1
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
ERR987722
|
MDR-TB
|
|
None
|
ERR212033
|
Other
|
lineage4.9
|
None
|
ERR2510490
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR13289665
|
Sensitive
|
lineage3
|
None
|
ERR13266951
|
Other
|
lineage3
|
None
|
SRR29772800
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4799242
|
Sensitive
|
lineage3
|
in
|
ERR4818391
|
Sensitive
|
lineage3
|
gb
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
SRR1166915
|
MDR-TB
|
lineage3
|
None
|
SRR29440850
|
Sensitive
|
lineage3
|
None
|
ERR2514821
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1162815
|
MDR-TB
|
lineage3
|
None
|
SRR12006550
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR22424806
|
MDR-TB
|
lineage3
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
ERR4819843
|
Sensitive
|
lineage3
|
gb
|
ERR4819809
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR502524
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR4798145
|
HR-TB
|
lineage3
|
in
|
ERR4820184
|
HR-TB
|
lineage3
|
gb
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
SRR1165399
|
MDR-TB
|
lineage3
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
SRR22249462
|
Sensitive
|
lineage3
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
SRR10808668
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1172310
|
HR-TB
|
lineage4.9
|
None
|
ERR4797720
|
XDR-TB
|
lineage3
|
in
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
ERR2510477
|
Pre-XDR-TB
|
lineage3
|
pk
|
SRR6964666
|
MDR-TB
|
lineage3
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR4800211
|
MDR-TB
|
lineage3
|
in
|
ERR323039
|
HR-TB
|
La2;lineage4.9
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
ERR4820382
|
Sensitive
|
lineage3
|
gb
|
ERR1035149
|
RR-TB
|
lineage3
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4814734
|
Other
|
lineage1.2.1.1
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR13423649
|
Sensitive
|
lineage2.2.1
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
SRR25827812
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage3
|
None
|
ERR4798415
|
Sensitive
|
lineage3
|
in
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
SRR25827605
|
Pre-XDR-TB
|
lineage2.2.1;lineage3;lineage4
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
ERR4799067
|
Sensitive
|
lineage3
|
in
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
SRR1183111
|
HR-TB
|
lineage4.9
|
None
|
ERR2513378
|
Other
|
lineage3
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR1183965
|
Sensitive
|
lineage4.9
|
None
|
ERR2514692
|
Other
|
|
None
|
SRR28351339
|
MDR-TB
|
lineage4
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR4829606
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR1167081
|
MDR-TB
|
lineage3
|
None
|
SRR1791725
|
Other
|
La1.8.1
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
ERR4800143
|
Sensitive
|
lineage3
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR17406772
|
Sensitive
|
lineage3
|
None
|
SRR2101035
|
Sensitive
|
lineage3
|
None
|
SRR28351588
|
MDR-TB
|
lineage3
|
None
|
ERR4798844
|
Other
|
lineage3
|
in
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR4798341
|
Pre-XDR-TB
|
lineage3
|
in
|
SAMN02414979
|
MDR-TB
|
lineage3
|
se
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
ERR4829128
|
MDR-TB
|
lineage3
|
pk
|
ERR2510519
|
Pre-XDR-TB
|
lineage3
|
pk
|
SRR2100653
|
Sensitive
|
lineage3
|
None
|
ERR176557
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR502511
|
Sensitive
|
lineage4.9
|
None
|
SRR1183049
|
RR-TB
|
lineage2.2
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SRR10315466
|
RR-TB
|
lineage2.2.1
|
None
|
SRR29230669
|
Sensitive
|
lineage3
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
ERR502510
|
Sensitive
|
lineage4.9
|
None
|
SRR1174897
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
SRR2100488
|
Sensitive
|
lineage3
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
SRR22251181
|
Sensitive
|
lineage3
|
None
|
SRR2100518
|
Sensitive
|
lineage3
|
None
|
ERR4829967
|
MDR-TB
|
lineage3
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
SRR15014742
|
MDR-TB
|
lineage3
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR2100509
|
Sensitive
|
lineage3
|
None
|
SRR6045323
|
Sensitive
|
lineage3
|
gb
|
ERR751326
|
Other
|
lineage4.9
|
None
|
ERR11081288
|
Sensitive
|
lineage3
|
None
|
SRR23961542
|
Other
|
La1;lineage4.9
|
None
|
SRR6397939
|
Sensitive
|
lineage3
|
ca
|
ERR990545
|
Other
|
lineage3
|
None
|
ERR4796704
|
Other
|
lineage3
|
in
|
SRR7535086
|
Other
|
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
SRR6397332
|
Sensitive
|
lineage3
|
ca
|
ERR230025
|
Sensitive
|
lineage3
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
SRR28351442
|
HR-TB
|
lineage3.1
|
None
|
ERR9786656
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR19428511
|
Sensitive
|
lineage3
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR294230
|
Sensitive
|
lineage3
|
None
|
ERR11044665
|
HR-TB
|
lineage3
|
None
|
ERR4820528
|
Sensitive
|
lineage3
|
gb
|
ERR4821257
|
Sensitive
|
lineage3
|
gb
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
SRR1180996
|
Sensitive
|
lineage4.9
|
None
|
ERR4831511
|
MDR-TB
|
lineage3
|
pk
|
SRR29124316
|
Other
|
lineage3
|
None
|
SRR28044371
|
Sensitive
|
lineage3
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|