Rv0668 - c.2925C>T
Drug resistance types
4 Sensitive
10 RR-TB
13 HR-TB
4 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.9 | 12 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1 | 3 |
| La3;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.2 | 3 |
| 1 | |
| lineage4.3.4.2.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.2.1.1 | 3 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.9 | 3 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage3 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR752229 | Other | lineage4.5 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR5341330 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR212001 | HR-TB | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR990545 | RR-TB | lineage3 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR473334 | HR-TB | lineage4.9 | None |
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