lineage | Count |
---|---|
15 | |
La1.3 | 4 |
La1.2 | 2 |
lineage4.9 | 12 |
lineage4.6.2.2 | 1 |
lineage4.5 | 2 |
lineage4.9;La1.3 | 1 |
lineage2.2.1 | 4 |
lineage1.1.3 | 1 |
lineage2.2.1.2 | 2 |
lineage3 | 3 |
La1.4 | 1 |
La1.7.1 | 1 |
lineage4.4 | 1 |
lineage2.2.2 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage2.2 | 2 |
lineage4.1 | 1 |
lineage5 | 1 |
lineage1.1.2 | 1 |
lineage1.1.3.1 | 1 |
lineage4 | 3 |
lineage4.1.2.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.4.2 | 1 |
lineage4.7 | 1 |
spoligotype | Count |
---|---|
None | 65 |
ID | Drug resistance | Lineage | Country iso2 | ERR3445504 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797046 | HR-TB | None | ERR4769408 | Other | La1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769457 | Other | lineage4.9 | None | ERR9786594 | Sensitive | lineage4.6.2.2 | None | ERR4769516 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4799025 | Pre-XDR-TB | None | ERR4811493 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR9901059 | Sensitive | lineage1.1.3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173740 | Other | None | SRR1173281 | RR-TB | lineage3 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR14782405 | HR-TB | None | SRR15315869 | MDR-TB | lineage4.5 | None | SRR16278274 | Other | La1.4 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR2446566 | Other | lineage4.1 | None | ERR4816967 | RR-TB | lineage5 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | SRR3732690 | Sensitive | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820324 | Other | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341456 | Other | None | ERR2446509 | Other | lineage3 | nl | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046492 | Other | None | SRR6046299 | HR-TB | None | ERR4811221 | Sensitive | lineage2.2.1 | cn | ERR4831117 | HR-TB | None | DRR188519 | Other | lineage4.4.2 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | ERR323108 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR108471 | HR-TB | lineage4 | None |
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