lineage | Count |
---|---|
lineage2.1 | 1 |
44 | |
lineage4 | 18 |
lineage4.1 | 2 |
lineage4.1.1.2 | 1 |
lineage4.9 | 12 |
lineage3 | 3 |
lineage2.2.1 | 6 |
lineage4.1.2 | 1 |
La1.2 | 1 |
lineage1.1.2 | 1 |
lineage2.2 | 4 |
lineage4.3.4 | 2 |
lineage1.1.3.1 | 1 |
lineage6.1.3 | 1 |
La3 | 1 |
lineage2.2.1.2 | 2 |
La1.7.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 105 |
ID | Drug resistance | Lineage | Country iso2 | SRR5341422 | HR-TB | lineage2.1 | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | SRR5341330 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045053 | Other | None | ERR2660539 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045217 | Other | lineage4 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR323045 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | SRR8217918 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR3797086 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR736875 | HR-TB | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866410 | Sensitive | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736835 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | SRR1167384 | Other | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR14782405 | HR-TB | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR176779 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675270 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | ERR176751 | HR-TB | None | ERR176643 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176651 | HR-TB | None | SRR3675456 | HR-TB | None |
---|