Rv2477c - c.544T>C
Drug resistance types
20 Sensitive
16 RR-TB
56 HR-TB
35 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
69 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| 3 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| M.canetti;lineage2.2 | 2 |
| La1.7;lineage4.9 | 7 |
| M.canetti;lineage4.9 | 4 |
| lineage2.2.1.2 | 2 |
| lineage4.9 | 68 |
| lineage4.9;lineage7 | 4 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage4.9 | 11 |
| lineage2.2.1 | 9 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.5 | 1 |
| lineage4.1.2.1 | 4 |
| lineage3 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| lineage4.4.1.1 | 1 |
| lineage4.6.2.2 | 2 |
| La1.7 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage5.2 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage6.1.3 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.4.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2 | 3 |
| lineage4.8 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.2.1.1 | 5 |
| lineage4.9;lineage9 | 1 |
| lineage2.1 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 3 |
| lineage1.1.3.1 | 1 |
| La1.2.BCG | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage1;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1;lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 200 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR234659 | HR-TB | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR12708416 | Sensitive | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR5341330 | Other | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR6046046 | Other | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR4811031 | Other | lineage4.5 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR2514552 | Sensitive | lineage3 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323037 | Other | lineage4.9 | None | ERR3801503 | Other | lineage4.6.2.2 | None | SRR3675387 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR4816656 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR473332 | Other | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR161037 | HR-TB | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6045053 | Other | lineage4 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR14782054 | Other | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR22251329 | Other | lineage2.1 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR9786843 | Other | None | ERR11252736 | Other | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR779852 | HR-TB | lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR400345 | Other | lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR4769452 | Other | lineage4.9 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR6359082 | Other | lineage4.9 | None |
|---|
