lineage | Count |
---|---|
lineage4.3.3 | 2 |
lineage4.3.4 | 1 |
lineage4.4.1.1.1 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
La3;lineage4 | 1 |
lineage4.3.4.2.1 | 2 |
lineage2.2.1 | 24 |
lineage4.9 | 185 |
La1.7.X-unk4;lineage4.9 | 1 |
lineage2.2.1;lineage4 | 2 |
La1.7.1 | 1 |
La1.7;lineage4.9;lineage7 | 3 |
lineage4 | 5 |
La1.8.1 | 3 |
lineage2.2 | 4 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage4.6.3;lineage4.9 | 1 |
La3;lineage4.9 | 8 |
La1.7;lineage4.9 | 8 |
lineage2.1;lineage4.9 | 2 |
lineage1.1.2 | 3 |
lineage4.8 | 3 |
lineage4.8.1 | 1 |
lineage3 | 4 |
lineage1;lineage4.9 | 2 |
lineage3.1.2.1 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
lineage4.1.1.2 | 1 |
La3;lineage4.3.4 | 1 |
lineage4.2;lineage4.8.1;lineage4.9 | 2 |
lineage4.1.2.1 | 3 |
La1;lineage4.9 | 3 |
lineage1.1.3.1 | 1 |
La1;lineage4.1.2 | 1 |
La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage4.9;lineage7 | 5 |
lineage4.1.1.3;lineage4.9 | 1 |
lineage3.1.2.1;lineage4 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage6.1.3 | 2 |
La1.2;La1.8.1 | 1 |
M.canetti;lineage1 | 1 |
lineage2.1;lineage4.1.4;lineage4.9 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
lineage4.4.1.2 | 1 |
La1.7;lineage3;lineage4.9;lineage7 | 1 |
lineage1.1.1;lineage4 | 1 |
lineage5.1.4 | 1 |
lineage4.8;lineage4.9 | 2 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4.9;lineage6.1.3 | 1 |
lineage2.2.1.2 | 2 |
3 | |
La2;lineage2.2 | 1 |
lineage4.1.2 | 1 |
La2;lineage4.9 | 1 |
La1.7.1;La1.7.X-unk4 | 1 |
lineage4.3.2.1 | 1 |
lineage4.9;lineage9 | 1 |
lineage4.4.2 | 1 |
lineage4.3.4.1 | 1 |
lineage2.2.1;lineage4.9 | 1 |
lineage2.2.1.1 | 1 |
lineage3;lineage4.9 | 1 |
lineage4.2;lineage4.9 | 2 |
lineage4.6.2.2 | 1 |
lineage4.2.1 | 1 |
lineage2.2.1.2;lineage7 | 1 |
La1.7;lineage4.9;lineage6 | 1 |
lineage4.5 | 1 |
lineage4.2.1.1;lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 330 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR9971041 | MDR-TB | lineage4.3.3 | None |
ERR736817 | HR-TB | lineage4.3.4 | None |
SRR12708409 | HR-TB | lineage4.3.3 | None |
SRR1181215 | Sensitive | lineage4.4.1.1.1 | None |
ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None |
ERR3283028 | Other | La3;lineage4 | None |
ERR161034 | HR-TB | lineage4.3.4.2.1 | None |
SRR12142339 | HR-TB | lineage2.2.1 | None |
SRR3675580 | Sensitive | lineage4.9 | None |
ERR502511 | Sensitive | lineage4.9 | None |
ERR400320 | Sensitive | lineage4.9 | None |
SRR1180391 | Sensitive | lineage4.9 | None |
SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
ERR4188247 | HR-TB | lineage4.9 | None |
SRR1792478 | HR-TB | La1.7.1 | None |
SRR6046210 | Other | lineage4.9 | None |
SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None |
SRR6045053 | Other | lineage4 | None |
SRR1791747 | Other | La1.8.1 | None |
SRR20969708 | HR-TB | lineage2.2 | None |
SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None |
SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
SRR6046046 | Other | lineage4.9 | None |
ERR3797048 | Other | La3;lineage4.9 | None |
ERR323108 | HR-TB | La1.7;lineage4.9 | None |
SRR3675495 | Other | lineage2.1;lineage4.9 | None |
SRR5341310 | Other | lineage1.1.2 | None |
ERR6866410 | Sensitive | lineage4.9 | None |
ERR702405 | Sensitive | lineage4.9 | None |
ERR13285068 | Sensitive | lineage4.9 | None |
SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None |
SRR6045548 | Sensitive | lineage4.9 | None |
SRR3675455 | Sensitive | lineage4.9 | None |
ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None |
SRR12708418 | HR-TB | lineage2.2.1 | None |
SRR5341300 | HR-TB | lineage4.9 | None |
ERR4798099 | Other | lineage4.9 | None |
ERR4799025 | Other | lineage4.8 | None |
ERR4831616 | MDR-TB | lineage2.2.1 | None |
SRR9971150 | RR-TB | lineage4.8.1 | None |
ERR6359066 | HR-TB | lineage4.9 | None |
SRR3675235 | Sensitive | lineage4.9 | None |
SRR29097004 | Other | lineage3 | None |
ERR926160 | Sensitive | lineage4.9 | None |
SRR14782054 | Other | lineage4.9 | None |
SRR10809074 | Sensitive | lineage4.9 | None |
ERR323045 | HR-TB | lineage1;lineage4.9 | None |
ERR502510 | Sensitive | lineage4.9 | None |
ERR3283030 | HR-TB | lineage4.9 | None |
SRR6046133 | HR-TB | lineage4.9 | None |
ERR1063883 | HR-TB | lineage4.9 | None |
SRR10315751 | MDR-TB | lineage4.8 | None |
ERR400345 | Other | lineage4.9 | None |
SRR29096943 | Sensitive | lineage3.1.2.1 | None |
SRR6046593 | Other | lineage4.9 | None |
SRR5341366 | Sensitive | lineage4.9 | None |
ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None |
SRR6045219 | HR-TB | lineage4.9 | None |
ERR3283047 | Sensitive | La3;lineage4.9 | None |
ERR3797063 | Sensitive | La3;lineage4.9 | None |
ERR926158 | Sensitive | lineage4.9 | None |
ERR4818252 | Sensitive | lineage4.1.1.2 | None |
SRR29096394 | Sensitive | lineage4.9 | None |
ERR4797184 | Sensitive | lineage4.9 | None |
ERR161039 | HR-TB | La3;lineage4.3.4 | None |
SRR29049025 | Sensitive | lineage4.9 | None |
ERR161037 | Other | lineage4.9 | None |
ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
SRR7496471 | Sensitive | lineage4 | None |
ERR6866125 | Sensitive | lineage4.1.2.1 | None |
SRR10808399 | Sensitive | lineage4.9 | None |
ERR926161 | Sensitive | lineage4.9 | None |
SRR6044876 | Sensitive | lineage4.9 | None |
SRR29231479 | RR-TB | lineage4.9 | None |
SRR6046245 | Other | lineage4.9 | None |
SRR10808805 | Other | La1;lineage4.9 | None |
SRR6511621 | Sensitive | lineage4.9 | None |
SRR20970043 | MDR-TB | lineage2.2.1 | None |
ERR1063862 | HR-TB | lineage4.9 | None |
ERR3273109 | HR-TB | lineage4 | None |
ERR751326 | Other | lineage4.9 | None |
ERR1023525 | HR-TB | La1.7;lineage4.9 | None |
ERR176779 | HR-TB | lineage4.9 | None |
ERR3283021 | HR-TB | lineage4.9 | None |
SRR26399265 | Other | lineage2.2.1 | None |
SRR29096659 | Sensitive | lineage4.9 | None |
SRR6046564 | Sensitive | lineage4.9 | None |
ERR323037 | Other | lineage4.9 | None |
SRR5341303 | Sensitive | lineage4.9 | None |
ERR4596910 | Sensitive | lineage4.9 | None |
ERR245794 | HR-TB | lineage4.3.4.2.1 | None |
SRR5341453 | Other | lineage4.9 | None |
ERR926154 | Sensitive | lineage4.9 | None |
ERR971389 | Sensitive | lineage4.9 | None |
SRR8217918 | HR-TB | lineage4.9 | None |
ERR4812155 | Other | lineage4.9 | None |
SRR29096179 | Sensitive | lineage4.9 | None |
ERR8479578 | Sensitive | lineage1.1.3.1 | None |
ERR473332 | Other | lineage4.9 | None |
SRR9970979 | Sensitive | lineage4.8 | None |
SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
SRR1175512 | Sensitive | lineage4.9 | None |
ERR3797046 | HR-TB | lineage4.9 | None |
SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None |
SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None |
SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
ERR779852 | Sensitive | lineage4.9 | None |
SRR3675585 | Sensitive | lineage4.9 | None |
ERR2041725 | MDR-TB | lineage4.1.2.1 | None |
SRR5341299 | HR-TB | lineage4.9 | None |
SRR2010299 | MDR-TB | lineage2.2.1 | None |
SRR6046485 | Other | lineage4.9 | None |
ERR245675 | Sensitive | lineage1.1.2 | None |
ERR6359070 | Sensitive | lineage4.9 | None |
ERR176560 | HR-TB | La1.7;lineage4.9 | None |
ERR3283025 | MDR-TB | La1.7;lineage4.9 | None |
ERR4769442 | Sensitive | lineage4.9 | None |
ERR181824 | HR-TB | lineage4.9 | None |
ERR3797079 | Sensitive | lineage4.9 | None |
ERR4797313 | Sensitive | lineage2.2.1 | None |
ERR3445502 | Sensitive | lineage4.9;lineage7 | None |
ERR4797474 | Sensitive | lineage4.9 | None |
ERR736875 | HR-TB | lineage4.9 | None |
SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None |
SRR28351455 | Other | lineage3.1.2.1;lineage4 | None |
ERR1063858 | HR-TB | lineage4.9 | None |
ERR4797350 | Sensitive | lineage1;lineage4.9 | None |
SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
SRR6045010 | Sensitive | lineage4.9 | None |
ERR176651 | Other | lineage4.9 | None |
ERR4769439 | HR-TB | lineage4.9 | None |
ERR387051 | Other | lineage4.9 | None |
SRR1180300 | Sensitive | lineage4.9 | None |
SRR5535933 | Other | lineage4.9 | None |
ERR9119669 | HR-TB | lineage4.9 | None |
ERR6358979 | Other | lineage4.9 | None |
ERR926162 | Sensitive | lineage4.9 | None |
ERR4831617 | MDR-TB | lineage2.2.1 | None |
ERR4799547 | HR-TB | lineage2.2.1 | None |
SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
SRR3675279 | Sensitive | lineage4.9 | None |
SRR29096710 | Sensitive | lineage4.9 | None |
SRR5341345 | Sensitive | lineage4.9 | None |
ERR9787256 | Other | lineage6.1.3 | None |
ERR736856 | Sensitive | lineage4.9 | None |
ERR181887 | Other | lineage4.9 | None |
SRR7240033 | Other | La1.2;La1.8.1 | None |
SRR14801749 | HR-TB | lineage4.9 | None |
ERR3797019 | Other | La1.8.1 | None |
ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10315567 | HR-TB | lineage2.2.1 | None |
ERR6359069 | Sensitive | lineage4.9 | None |
SRR15014655 | Other | M.canetti;lineage1 | None |
ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None |
ERR3283011 | Other | La3;lineage4.9 | None |
SRR5341461 | HR-TB | lineage4.9 | None |
ERR1063846 | HR-TB | lineage4.9 | None |
SRR5341323 | Sensitive | lineage4.9 | None |
ERR400336 | Sensitive | lineage4.9 | None |
ERR926163 | Other | lineage4.9 | None |
ERR3797064 | Other | La3;lineage4.9 | None |
ERR1035122 | Sensitive | lineage4.9 | None |
SRR12416842 | HR-TB | lineage4.9 | None |
ERR6866639 | Other | lineage4.9 | None |
SRR3675229 | Sensitive | lineage4.9 | None |
ERR133825 | HR-TB | La1;lineage4.9 | None |
ERR926164 | Other | lineage4.9 | None |
ERR1063849 | HR-TB | lineage4.9 | None |
SRR3675247 | Other | lineage4.9 | None |
SRR3675246 | Other | lineage4.9 | None |
ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None |
ERR323056 | HR-TB | lineage4.4.1.2 | None |
ERR2660539 | Other | lineage4.9 | None |
ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
ERR3797086 | Sensitive | lineage4.9 | None |
SRR1180399 | Sensitive | lineage4.9 | None |
SRR3675456 | RR-TB | lineage4.9;lineage7 | None |
ERR4769452 | Other | lineage4.9 | None |
SRR5341467 | Other | lineage4.9 | None |
SRR6044835 | Other | lineage4.9 | None |
SRR1180413 | Sensitive | lineage4.9 | None |
ERR3803778 | Other | lineage6.1.3 | None |
ERR323085 | Sensitive | lineage4.9 | None |
ERR736834 | Sensitive | lineage4.9 | None |
ERR212125 | HR-TB | lineage4.9 | None |
SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None |
SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None |
ERR6359082 | Other | lineage4.9 | None |
ERR4796929 | Sensitive | lineage4.9 | None |
ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None |
ERR4797264 | Sensitive | lineage4.9 | None |
ERR4800527 | MDR-TB | lineage2.2.1 | None |
ERR2513283 | Sensitive | lineage5.1.4 | None |
ERR4024991 | Other | lineage4.8;lineage4.9 | None |
SRR5341412 | Pre-XDR-TB | lineage3 | None |
ERR405209 | Sensitive | La1.7;lineage4.9 | None |
SRR10808730 | Other | lineage4.9 | None |
ERR4769497 | Other | La1;lineage4.9 | None |
ERR6866022 | Other | lineage4.8;lineage4.9 | None |
SRR6045555 | Other | lineage4.9 | None |
SRR1180312 | Sensitive | lineage4.9 | None |
ERR926165 | Sensitive | lineage4.9 | None |
SRR16156804 | Sensitive | lineage4.9 | None |
SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
SRR6046382 | Sensitive | lineage2.2.1 | None |
ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
ERR4811030 | Sensitive | lineage4.9 | None |
SRR5341373 | Other | lineage4.9 | None |
SRR1175127 | Other | lineage2.2.1.2 | None |
ERR1063896 | Sensitive | None | |
SRR3675522 | Other | lineage4.9 | None |
SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None |
ERR1063839 | MDR-TB | La2;lineage2.2 | None |
SRR1180444 | Sensitive | lineage4.9 | None |
ERR4831620 | MDR-TB | lineage2.2.1 | None |
SRR1159378 | Other | lineage4.9 | None |
SRR9970980 | HR-TB | lineage4.1.2 | None |
SRR5341400 | Sensitive | lineage4.9 | None |
SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None |
SRR20969731 | Other | lineage2.2.1 | None |
ERR736837 | Pre-XDR-TB | lineage4.9 | None |
ERR323115 | Sensitive | lineage4.9 | None |
SRR5341425 | Other | lineage4.9 | None |
ERR1063857 | MDR-TB | La2;lineage4.9 | None |
SRR5341384 | HR-TB | lineage4.9 | None |
ERR3283014 | Sensitive | La3;lineage4.9 | None |
ERR3283031 | Sensitive | La3;lineage4.9 | None |
ERR1063855 | Other | lineage4.9 | None |
ERR3797015 | HR-TB | lineage4.9 | None |
ERR4769521 | RR-TB | lineage4.9 | None |
SRR16156817 | Other | lineage4.9 | None |
SRR5341330 | Other | lineage4.9 | None |
ERR212123 | Other | lineage4.9 | None |
SRR1180420 | Sensitive | lineage4.9 | None |
SRR6045347 | Other | lineage4.9 | None |
SRR1181283 | Sensitive | lineage4.9 | None |
ERR4769457 | Other | lineage4.9 | None |
ERR4769450 | Other | lineage4.9 | None |
ERR4769474 | HR-TB | lineage4.9 | None |
ERR124636 | Sensitive | lineage4.9 | None |
ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None |
ERR216938 | HR-TB | La1.7;lineage4.9 | None |
SRR9970981 | RR-TB | lineage4.3.2.1 | None |
ERR6359074 | HR-TB | lineage4.9 | None |
ERR400326 | Other | lineage4.9 | None |
SRR12708392 | Other | lineage2.2.1 | None |
SRR6046720 | HR-TB | lineage4.9;lineage9 | None |
ERR2041726 | MDR-TB | lineage4.1.2.1 | None |
DRR188519 | Other | lineage4.4.2 | None |
SRR1180319 | Sensitive | lineage4.9 | None |
ERR926159 | Sensitive | lineage4.9 | None |
SRR1181349 | Sensitive | lineage4 | None |
ERR212138 | HR-TB | lineage4.9 | None |
ERR4799378 | Sensitive | lineage4.9 | None |
SRR3675541 | Sensitive | lineage4.9 | None |
SRR3675387 | Other | lineage4.9 | None |
ERR6358951 | Sensitive | lineage4.9 | None |
ERR3797047 | MDR-TB | lineage4.9 | None |
SRR14782405 | HR-TB | lineage4.9 | None |
SRR21677886 | Sensitive | lineage4.9 | None |
ERR4797193 | HR-TB | lineage1.1.2 | None |
SRR5341308 | Sensitive | lineage4.9 | None |
SRR1172796 | Sensitive | lineage2.2.1.2 | None |
ERR1034634 | HR-TB | lineage4.9 | None |
SRR9971113 | Other | lineage2.2.1 | None |
ERR11465353 | Sensitive | lineage4.3.4.1 | None |
ERR3797065 | RR-TB | lineage4.9 | None |
ERR5311094 | HR-TB | lineage4.9 | None |
ERR4799513 | HR-TB | lineage2.2 | None |
SRR29097054 | Sensitive | lineage4.9 | None |
SRR11972367 | Sensitive | lineage2.2.1 | None |
SRR9971080 | RR-TB | lineage2.2.1 | None |
SRR9971112 | Other | lineage2.2.1 | None |
SRR29017081 | Sensitive | lineage4.9 | None |
SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None |
SRR6079962 | HR-TB | lineage2.2.1.1 | None |
SRR12708416 | Sensitive | None | |
ERR3283057 | Sensitive | La3;lineage4.9 | None |
SRR5341396 | Other | lineage3;lineage4.9 | None |
SRR11662690 | HR-TB | lineage4.9 | None |
SRR5341469 | HR-TB | lineage4.9 | None |
SRR5341456 | Other | lineage4.9 | None |
SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None |
ERR4811493 | HR-TB | lineage4.9 | None |
SRR20970016 | Other | lineage2.2 | None |
SRR5341387 | Other | lineage4.9 | None |
SRR28351339 | MDR-TB | lineage4 | None |
ERR212001 | HR-TB | None | |
SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
ERR176778 | HR-TB | lineage4.9 | None |
ERR212034 | HR-TB | La1.7;lineage4.9 | None |
ERR3283055 | HR-TB | lineage4.9 | None |
ERR3797087 | Sensitive | lineage4.9 | None |
ERR926156 | Sensitive | lineage4.9 | None |
ERR9786076 | Sensitive | lineage3 | None |
SRR1180355 | Sensitive | lineage4.9 | None |
SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
SRR3675477 | Sensitive | lineage4.9 | None |
SRR6046878 | Other | lineage4.9 | None |
SRR6045217 | Sensitive | lineage4.9 | None |
ERR4796254 | Sensitive | lineage4.9 | None |
ERR4819809 | HR-TB | lineage4.6.2.2 | None |
SRR1180410 | Sensitive | lineage4.9 | None |
ERR6866807 | Other | lineage4.9 | None |
ERR2512770 | Sensitive | lineage4.2.1 | None |
SRR7236177 | Other | La1.8.1 | None |
ERR323062 | Sensitive | lineage4.9 | None |
ERR926155 | Sensitive | lineage4.9 | None |
ERR926157 | Sensitive | lineage4.9 | None |
SRR1158918 | Sensitive | lineage4.9 | None |
SRR1175506 | Sensitive | lineage4.9 | None |
SRR1180250 | Other | lineage4.9 | None |
ERR137286 | Other | lineage4.9 | None |
SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None |
ERR323066 | Sensitive | lineage4.9 | None |
ERR4769444 | HR-TB | lineage4.9 | None |
ERR3283040 | HR-TB | lineage4.9 | None |
SRR1180406 | Sensitive | lineage4.9 | None |
SRR10808668 | Sensitive | lineage2.2.1 | None |
SRR9971114 | Other | lineage2.2.1 | None |
ERR736872 | HR-TB | lineage4.9 | None |
ERR4811031 | Sensitive | lineage4.5 | None |
SRR3675270 | Other | lineage4.9 | None |
SRR28351347 | Other | lineage3 | None |
ERR4810624 | MDR-TB | lineage2.2 | None |
ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None |
SRR29096882 | Sensitive | lineage4.9 | None |