Rv3596c - c.330G>C


Drug resistance types
38 Sensitive 12 RR-TB 78 HR-TB 31 MDR-TB 5 Pre-XDR-TB 1 XDR-TB 96 Other
lineage Counts
lineage Count
lineage4.9 135
La1.2;La1.8.1 1
lineage1;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.9 9
La1.7.1;La1.7.X-unk4 1
La1;lineage4.9 3
La1.7;M.canetti;lineage4.9 2
La1.7;lineage4.9 8
La2;lineage4.9;lineage9 1
La2;lineage4.9 2
lineage4.6.1.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.2.1 16
lineage2.2.1.2 2
lineage4.3.3 2
lineage4.2.1.1 1
lineage3;lineage4.9 1
lineage1.1.1;lineage4 1
4
La1.7.X-unk4;lineage4.9 1
lineage4.6.3;lineage4.9 2
M.canetti;lineage4.9 2
lineage4.9;lineage6.1.3 1
lineage6.1.1 2
lineage3.1.2.2 1
lineage4.5 1
lineage2.2.2 1
lineage4.3.2.1 1
lineage4.1.2.1 2
lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage2.2.1.1 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.4.1.2 1
La1;lineage4.1.2 1
lineage4.9;lineage7 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 1
lineage5.1.4 1
lineage2.2 3
La3;lineage4 1
lineage4.4.2 1
lineage1.1.3.1 1
La1.6;lineage4 1
lineage4.8;lineage4.9 2
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.8.1 3
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage3 3
lineage4.9;lineage9 2
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.4.1.1 1
La1.7.1;lineage4.9 1
lineage4 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.1;lineage4.9 1
lineage2.2.1;lineage4.9 1
lineage2;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.7;lineage4.9;lineage6 1
lineage4.3.4 1
lineage2.2.1;lineage4 1
lineage4.1.2 1
lineage4.2.1 1
lineage4.8 1
lineage3.1.2.1;lineage3.1.2.2 1
spoligotype Counts
spoligotype Count
None 261
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR323066 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797063 Other La3;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4811030 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR12416842 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR3675246 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR3797046 HR-TB lineage4.9 None
SRR1158918 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR212125 HR-TB lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
SRR6045892 Sensitive lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4811493 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR4796577 HR-TB None
SRR12708416 Sensitive None
ERR6866807 RR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR176651 Other lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR5341330 Other lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR2693252 HR-TB lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR926156 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3283031 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR3799304 RR-TB lineage6.1.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR926160 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR400336 Sensitive lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR176779 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675387 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR3675229 Sensitive lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6044876 Sensitive lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR14782405 HR-TB lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797184 HR-TB lineage4.9 None
SRR1184329 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR4769450 Other lineage4.9 None
SRR1238558 Other lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR926161 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR3283028 Other La3;lineage4 None
ERR4769442 Sensitive lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR18289175 Sensitive lineage2.2.1 None
ERR1063896 HR-TB None
ERR987722 MDR-TB None
SRR28351554 Other La1.6;lineage4 None
ERR4769497 Other La1;lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR4829033 Sensitive lineage2.2.1 it
ERR4810624 MDR-TB lineage2.2 None
SRR20632814 Sensitive lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR1159378 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
ERR926165 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR6045832 Other lineage4.9 None
SRR1140724 Other lineage2.2.1 None
ERR3797015 HR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR4816470 HR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR5311077 Other La1.8.1 None
SRR3675235 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR323107 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR19295647 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1196478 Other lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR6046594 Other lineage4.9 None
ERR926155 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR11662690 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
ERR4797474 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR4769493 Other lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR3797067 Other La1.8.1 None
SRR6046492 Other lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR8649115 Sensitive lineage2.2.1 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR5535933 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4798504 RR-TB lineage3 None
ERR6866639 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1180226 HR-TB lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4799025 Other lineage4.8 None
ERR9119669 MDR-TB lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR14782054 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None