Rv3596c - c.330G>C
Drug resistance types
97 Sensitive
8 RR-TB
110 HR-TB
18 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 5 |
| 90 | |
| lineage4.9 | 70 |
| La1.8.1 | 5 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage2.2.1 | 21 |
| lineage4 | 80 |
| lineage2.2 | 5 |
| lineage4.1.2;lineage3.1 | 1 |
| lineage4.1 | 2 |
| lineage4.5 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.2 | 2 |
| La2 | 1 |
| lineage4.7 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| La1 | 1 |
| lineage6.1.1 | 2 |
| lineage4.9;La1.3 | 1 |
| La1.2 | 1 |
| La1.3 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 315 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR17658565 | Other | lineage3 | None | SRR14801749 | Sensitive | None | SRR14782405 | HR-TB | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | SRR3675477 | Other | lineage4.9 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | SRR3675229 | Other | lineage4 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675279 | Other | None | ERR4815550 | Other | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR176651 | HR-TB | None | SRR3675387 | Sensitive | None | ERR181887 | HR-TB | None | SRR3675501 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675510 | Other | None | SRR3675547 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR212123 | Other | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | None | ERR4816470 | Other | lineage3 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818929 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341300 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819462 | Other | lineage4 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341470 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341456 | Other | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6045053 | Other | None | SRR6046193 | Sensitive | lineage3.1.2.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR4829033 | Sensitive | lineage2.2.1 | it | SRR6046299 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | ERR4830353 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6511621 | HR-TB | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831638 | Sensitive | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR6982388 | Sensitive | lineage4.1.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR502524 | HR-TB | La2 | None | ERR502943 | HR-TB | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR8649115 | Sensitive | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1063862 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR137286 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283040 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797036 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811493 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR4812155 | Sensitive | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR736848 | HR-TB | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175473 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172310 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None |
|---|
