EBG00000313339 - n.2108A>G


Drug resistance types
100 Sensitive 40 RR-TB 68 HR-TB 32 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 205 Other
lineage Counts
lineage Count
57
lineage2.1 4
lineage4.9 67
lineage5.2 2
lineage2.2.1 39
lineage2.2.1.1 4
lineage4 65
lineage4.1 5
lineage4.8 26
lineage4.3.4.1 8
lineage4.1.2.1 19
lineage4.6.2.2 5
lineage4.1.2 7
lineage4.4.1.1 7
lineage4.1.1 8
lineage4.3.3 5
lineage4.3.2.1 1
lineage4.4.1.2 1
lineage1.1.1.1 1
lineage4.4.2 4
lineage4.1.1.3 2
lineage4.3.4 1
lineage4.3.4.2.1 3
La1.8.1 4
La1.3 7
lineage4;lineage3.1 1
La1.2 3
lineage4.9;La1.3 1
lineage1.1.2 9
lineage2.2.1.2 4
lineage3.1.2.1 2
lineage4.3.4.2 4
lineage4.5 3
lineage1.1.3.1 2
lineage3.1.1 5
lineage6.1.3 1
lineage6 1
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.4.1.1.1 1
lineage4.2.1 2
La2 1
lineage3 24
lineage2.2.2 3
lineage4.2.2 1
lineage7;lineage2.2.1.2 1
lineage4.3.2 2
lineage2.2 2
lineage1.2.1.2 1
lineage4;lineage2.2 1
lineage1.2.2.2 2
lineage4.7 2
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage3.1.2 4
lineage4.6.5 2
lineage4.6 3
lineage5 2
lineage3.1 1
lineage1.2.1.1 1
lineage1.1.3 2
lineage4.1.3 2
lineage3.1.3 1
lineage4.1.1.2 1
lineage4.1.1.3.1 2
lineage1.2.1.2.1 2
lineage4.4 1
lineage4.3.1.1 2
La1.6 1
lineage4.2.2.2 2
lineage1.1.3.3 1
lineage4.3.1 1
spoligotype Counts
spoligotype Count
None 464
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6511621 HR-TB None
ERR4831618 MDR-TB lineage2.1 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR4831117 HR-TB None
ERR502478 RR-TB lineage4.9 None
ERR4872077 Pre-XDR-TB lineage5.2 None
ERR502479 RR-TB lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6982246 Sensitive lineage4 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4831657 MDR-TB lineage2.2.1 None
ERR4831739 MDR-TB lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR502510 Sensitive lineage4 None
SRR6855695 Sensitive lineage4.8 None
SRR6981961 Sensitive lineage2.2.1 None
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR4831863 HR-TB lineage2.2.1.1 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR8217918 HR-TB None
ERR502531 Other lineage4.9 None
SRR7131004 Other lineage4.6.2.2 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7496471 Sensitive None
SRR9613540 Sensitive lineage4.6.2.2 None
SRR9970980 Other lineage4.1.2 None
SRR9971382 Sensitive lineage4.4.1.1 None
SRR9971372 MDR-TB lineage4.1.1 None
SRR7535082 Sensitive lineage4 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR4818180 Other lineage4.8 gb
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR9971114 Other lineage2.2.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR9971144 RR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
ERR323107 Other lineage4 None
ERR323108 HR-TB lineage4 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323066 Sensitive lineage4 None
ERR323085 Sensitive lineage4 None
DRR185000 Other lineage1.1.1.1 None
DRR188519 Other lineage4.4.2 None
ERR067699 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR1034634 HR-TB None
ERR1035122 Sensitive None
ERR1063857 HR-TB None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR1063858 HR-TB None
ERR1063896 Sensitive None
ERR1063883 Sensitive lineage4 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796626 Other lineage4.1.2 None
ERR10796595 Other lineage4.9 None
ERR10796620 Other lineage4.1.1 None
ERR10796574 Other lineage4.9 None
ERR10796629 Other lineage4 None
ERR1213932 Sensitive lineage4.1.2.1 None
ERR10796633 RR-TB lineage4.3.4 None
ERR11465511 Sensitive lineage4.3.4.2.1 None
ERR137286 Sensitive lineage4 None
ERR133825 Sensitive lineage4 None
ERR4820922 Other lineage4.1.2.1 gb
ERR323115 Sensitive lineage4 None
ERR3283014 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283046 MDR-TB lineage4.9 None
ERR3283025 HR-TB None
ERR3283028 Other None
ERR3283033 Sensitive lineage4.9 None
ERR3283031 HR-TB None
ERR3283021 HR-TB None
ERR3283053 Other lineage4.9 None
ERR3283055 HR-TB None
ERR3283047 HR-TB None
ERR3439489 RR-TB La1.8.1 None
ERR3283057 HR-TB lineage4 None
ERR3445504 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3445501 HR-TB None
ERR3797067 Other La1.8.1 None
ERR3797046 HR-TB None
ERR3797048 HR-TB None
ERR3797021 Other La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR3797063 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797087 Sensitive lineage4 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797086 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4769408 Other La1.3 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4596910 Sensitive lineage4 None
ERR4627369 Other La1.8.1 None
ERR4024991 Other None
ERR473332 Other lineage4 None
ERR4769404 Other La1.3 None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769406 Other lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769427 Other La1.2 None
ERR4769452 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4769506 Sensitive La1.3 None
ERR4769497 HR-TB La1.2 None
ERR4769521 HR-TB None
ERR4769516 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769552 Other La1.3 None
ERR4796254 Sensitive lineage4 None
ERR4769555 Other La1.3 None
ERR4797184 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797474 Other None
ERR4797264 Sensitive None
ERR4798099 Other None
ERR4799378 Sensitive lineage4 None
ERR4799025 Pre-XDR-TB None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4811493 HR-TB None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR6197034 Other lineage4.9 None
ERR6197030 Other lineage4.9 None
ERR6866022 Other None
ERR6358979 Other None
ERR736837 Other lineage4.9 None
ERR6866410 Sensitive None
ERR6866639 Other None
ERR6866547 Sensitive lineage4 None
ERR736834 Sensitive lineage4 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR736848 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR752229 Other lineage4.5 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9117806 Other lineage4.8 None
ERR9117740 Other lineage3.1.1 None
ERR9117818 Sensitive lineage1.1.2 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR9787256 Other lineage6.1.3 None
ERR9786639 Sensitive lineage4.8 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787362 Sensitive lineage6 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR10808399 Sensitive lineage4 None
SRR1062919 HR-TB lineage2.2.1 None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR11342634 MDR-TB lineage4.8 None
SRR10808805 Sensitive None
SRR10808668 Sensitive lineage2.2.1 None
SRR10809074 Sensitive lineage4 None
SRR1140724 HR-TB lineage2.2.1 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR11349153 RR-TB lineage4.1.1 None
SRR11349178 MDR-TB lineage4.4.1.1.1 None
SRR11342683 Other lineage4.1.2 None
SRR1158918 Sensitive lineage4 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1173777 Other lineage4 None
SRR1173568 Other lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR13180362 Sensitive lineage4.1.2.1 None
SRR13888750 Other La2 None
SRR14801749 Sensitive None
SRR1183965 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR13180204 Sensitive lineage3 None
SRR14179705 Pre-XDR-TB lineage3 None
SRR14782405 HR-TB None
SRR18002875 MDR-TB lineage2.2.2 None
SRR16157123 Other lineage4.9 None
SRR18002899 RR-TB lineage2.2.1 None
SRR18002888 RR-TB lineage2.2.1 None
SRR18002896 Pre-XDR-TB lineage2.2.1 None
SRR18002987 Other lineage2.2.1 None
SRR18002961 Other lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR18003038 Other lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18572456 Sensitive lineage4.9 None
SRR18213736 MDR-TB lineage3 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19303820 RR-TB lineage4.8 None
SRR20969731 Other lineage2.2.1 None
SRR19304109 Other lineage4.8 None
SRR19325559 Sensitive lineage4.3.2 None
SRR20969542 Other lineage4.4.2 None
SRR20969708 HR-TB lineage2.2 None
SRR21658553 Sensitive lineage4.3.3 None
SRR20970016 Other lineage2.2 None
SRR21727888 Other lineage1.2.1.2 None
SRR8692790 RR-TB lineage4 None
SRR8692783 Other lineage4.9 None
SRR22048536 Other lineage4.3.3 None
SRR8692812 Other lineage4.9 None
SRR8692807 Other lineage4.9 None
SRR8692810 Other lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692822 Other lineage4.9 None
SRR8692858 Sensitive lineage4.9 None
SRR8692885 Other lineage4.9 None
SRR8692879 HR-TB lineage4.9 None
SRR8692881 Other lineage4.9 None
SRR8692782 Other lineage4.9 None
SRR8692897 Other lineage4.9 None
SRR8692898 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692800 Other lineage4 None
SRR8692824 Other lineage4.9 None
SRR8692878 Other lineage4.9 None
SRR8692825 Other lineage4.9 None
SRR8692828 Other lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692894 Other lineage4.9 None
SRR8692907 Other lineage4.9 None
SRR8692882 HR-TB lineage4.9 None
SRR8692823 Other lineage4.9 None
SRR8692791 Other lineage4.9 None
SRR8692775 Other lineage4.9 None
SRR8692867 Other lineage4.9 None
SRR8692838 Other lineage4.9 None
ERR4815193 MDR-TB lineage4.8 None
SRR8692871 Other lineage4.9 None
ERR4815172 Other lineage1.2.2.2 None
SRR8692887 Other None
SRR8692899 Other lineage4.9 None
ERR4815268 Other lineage4.8 None
SRR3675474 Other lineage4.1.1 None
ERR4815281 Other lineage4.4.2 None
SRR6046668 Sensitive lineage1.1.2 gb
ERR4814341 Other lineage4.7 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4815301 Other lineage4.4.2 None
ERR4814714 Other lineage3 None
ERR4815777 Other lineage4.9 None
ERR4814415 Other lineage3.1.1 None
ERR4814709 Other lineage4.1.1 None
ERR4814356 Pre-XDR-TB lineage3.1.2 None
ERR2229760 Sensitive lineage4.8 dk
SRR3675227 Other lineage4.9 None
ERR4815499 Other lineage4.3.4.2 None
ERR702405 Sensitive lineage2.1 None
ERR4814745 Other lineage4.6.5 None
SRR3675246 Sensitive lineage4 None
SRR3675230 RR-TB lineage3 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR4815528 Other lineage4.8 None
ERR4814841 Other lineage4.1 None
SRR3675270 HR-TB None
ERR4814874 MDR-TB lineage1.1.2 None
ERR4814986 Other lineage4.3.4.2 None
ERR4813263 MDR-TB lineage4.8 None
ERR4814930 Other lineage4.4.1.1 None
SAMEA3501073 RR-TB lineage4.8 None
SRR3675511 Sensitive lineage4.6 None
ERR4815572 Other lineage4.1.2.1 None
ERR4815956 Other lineage1.1.2 None
ERR4815883 Sensitive lineage4.1.2.1 None
ERR4816967 RR-TB lineage5 None
ERR4815944 HR-TB lineage4.1.2.1 None
ERR2027290 RR-TB lineage3.1 None
ERR4816009 Other lineage1.1.2 None
ERR2027250 Other lineage3.1.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4816093 Other lineage1.1.3 None
ERR4816101 Other lineage4.1.2.1 None
ERR2027256 Other lineage4.1.2 None
ERR4817060 RR-TB None
ERR4816198 Sensitive lineage4.1.3 None
ERR2027284 HR-TB lineage4.6.2.2 None
SRR5341422 HR-TB lineage2.1 None
ERR4816270 Other lineage4.1.2.1 None
ERR4817398 Other lineage3.1.1 None
ERR212123 Other None
ERR4816531 Other lineage4.1.2 None
SRR5341384 Sensitive lineage4.9 None
ERR4816397 Other lineage1.1.2 None
ERR4816699 Other lineage4.6 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4817189 Other lineage4.7 None
ERR4816696 Other lineage3 None
ERR4816703 Sensitive lineage4.5 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR2229791 RR-TB lineage4.9 None
ERR4816831 Other lineage4.1.2.1 None
ERR4816756 RR-TB None
ERR4816804 Other lineage4.1 None
ERR4816883 Other lineage4.5 None
ERR4818110 Sensitive lineage4.9 None
SRR4033549 HR-TB lineage2.2.2 None
ERR4818691 Other lineage4.8 None
ERR2512986 Other lineage3 None
ERR2513121 Sensitive lineage3.1.3 None
ERR2446566 Other lineage4.1 None
ERR4818810 Other lineage2.2.1 None
ERR4818116 Other lineage4.3.4.2 None
ERR4818190 Other lineage4.8 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4818393 RR-TB lineage3 None
ERR245675 Sensitive lineage1.1.2 None
ERR4818252 Other lineage4.1.1.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818904 Other lineage4.8 None
ERR4819051 Other lineage4 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4818556 Other lineage3 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4818522 Pre-XDR-TB lineage3 None
SRR5341453 Sensitive None
ERR4817569 Other lineage4.3.4.1 None
ERR4818964 Other lineage1.2.1.2.1 None
ERR4817584 MDR-TB lineage3 None
SRR5341366 Sensitive lineage4 None
ERR4819140 Other lineage4.1.2.1 None
SRR5341373 HR-TB lineage4 None
ERR2513830 RR-TB lineage4.8 None
SRR5341387 Other lineage4 None
ERR4820266 RR-TB lineage3 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819284 Other lineage4.3.4.1 None
SRR5341400 HR-TB lineage4 None
ERR4819329 Sensitive lineage4.6.2.2 None
ERR4819515 HR-TB lineage4.2.1 None
ERR2514073 Other lineage4.1.1.3.1 None
SRR5341425 Other lineage4 None
ERR4820324 Other lineage4 None
ERR4819528 RR-TB lineage3 None
ERR2514267 MDR-TB lineage2.2.1.2 None
ERR4820397 Other lineage4.9 None
ERR4820746 RR-TB lineage3 None
ERR4819555 Other lineage4.8 None
SRR6398013 Sensitive lineage4.1.2 ca
ERR4820410 Pre-XDR-TB lineage3.1.1 None
SRR5341432 HR-TB lineage4 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4819765 Other lineage4.1 None
SRR5341456 Other None
SRR5341455 Sensitive lineage4 None
SRR5341293 HR-TB lineage4 None
ERR2514645 Other lineage4.3.4.1 None
SRR5341298 Sensitive lineage4 None
SRR5341300 Other lineage4 None
ERR4819793 Other lineage4.9 None
SRR5341299 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
ERR4819863 RR-TB lineage4.9 None
SRR5341306 Pre-XDR-TB lineage4.4 None
SRR5341313 HR-TB None
SRR5341310 Other lineage1.1.2 None
SRR5341315 Sensitive None
ERR4819955 Other lineage3 None
ERR4820614 Other lineage3.1.2 None
ERR2515230 Sensitive lineage4.8 None
ERR4820833 HR-TB None
ERR4820679 Other lineage4.8 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
SRR5341467 Other lineage4 None
SRR5341461 Sensitive lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR2693238 HR-TB lineage4.9 None
ERR4821051 Other lineage1.2.1.2.1 None
ERR4821796 Other lineage4.1.1 None
SRR5341469 Other lineage4 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR6045445 Other lineage4.3.1.1 None
SRR3675291 Sensitive lineage4.6 gb
ERR4821119 Other lineage4.4.1.1 None
ERR2660539 Other lineage4.9 None
SRR5535933 HR-TB None
ERR4821143 RR-TB lineage4.9 None
ERR4821245 Other lineage4.1.2.1 None
ERR4821264 Other lineage1.1.3 None
ERR4821981 Other lineage4.1.2.1 None
ERR4821409 Other lineage4.8 None
ERR4821310 Other lineage5 None
ERR4821325 Other lineage3 None
ERR4821334 RR-TB lineage4.1.3 None
ERR4821341 Other lineage4.3.4.1 None
ERR4822043 Other lineage4.1.1 None
ERR4822076 Other lineage4.1.2.1 None
ERR4821417 Other lineage1.1.3.1 None
ERR4822104 RR-TB lineage3 None
ERR4822170 Other lineage4.1.1.3 None
ERR4822179 Sensitive lineage3 None
ERR4821572 Other lineage2.1 None
ERR4821773 Other La1.6 None
ERR4821610 Other lineage4.3.2 None
ERR4821655 Sensitive lineage4 None
ERR4821679 Other lineage4.3.3 None
SRR6045599 Other lineage4.8 None
SRR6045683 Other lineage3.1.2 None
SRR6045743 Other lineage3 None
SRR5818612 Other lineage4.2.2.2 None
SRR6045805 Other lineage4.3.1.1 None
SRR5818672 Other lineage1.2.2.2 None
SRR6045894 Other lineage4.8 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045892 Sensitive None
SRR6044936 Other lineage4 None
SRR6044876 Sensitive lineage4 None
SRR6045053 Other None
SRR6045010 Other lineage4 None
SRR6045158 Other lineage4.9 None
SRR6045986 Other lineage3 None
SRR6045191 Sensitive lineage4.9 None
SRR6046246 Other lineage3 None
SRR6046046 Other None
SRR6046253 HR-TB lineage4.9 None
SRR6045312 Other lineage1.1.3.3 None
SRR6046275 Other lineage3.1.1 None
SRR6046259 Sensitive lineage4.9 None
SRR6046299 HR-TB None
SRR6046291 Other lineage3 None
ERR4829039 RR-TB lineage4.3.1 None
SRR6046385 Other lineage4.9 None
SRR6046343 Other lineage2.2.1 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046492 Other None
SRR6046463 Other lineage4.4.1.1 None
SRR6046848 Other lineage4.6.5 None
SRR6046878 HR-TB lineage4 None
SRR6367397 Other lineage4.1.2.1 None