EBG00000313339 - n.2108A>G


Drug resistance types
85 Sensitive 28 RR-TB 45 HR-TB 25 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 106 Other
lineage Counts
lineage Count
lineage4.9 106
lineage3 9
lineage2.2.1 29
lineage4.9;lineage7 2
lineage2.2;lineage4 1
lineage3.1.2.1 4
lineage4.1.2.1 10
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
lineage4.3.3 3
lineage1.2.1.1 1
lineage4.8 18
3
lineage4.1.1.3.1 1
lineage4.1.2 3
La1.8.1 2
lineage2.2.1.1 3
La1.2 2
lineage4.1.1.1 3
lineage3;lineage4 2
La3;lineage4.9 8
La1.7;lineage4.9 6
La1;lineage2;lineage4.9 1
lineage4.3.4.1;lineage4.9 1
lineage3.1.2.1;lineage4.9 1
lineage4.4.1.1 5
lineage4.4.2 2
lineage4 2
lineage1.1.2 4
lineage4.2.1 1
lineage4.3.4.2.1 3
lineage1.1.3.1 1
lineage4.4.1.1.1 1
lineage2.2.2 3
lineage4.2.2 1
lineage4.3.4.1 3
lineage3;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 3
lineage4.1.1.3 3
La1.3 4
lineage1.1.3.3 1
lineage2.2 2
La1.7;lineage4.9;lineage6 1
lineage4.5 1
lineage4.6 2
lineage4.2.1.1;lineage4.3.3 1
lineage4.6.3;lineage4.9 1
lineage4.3.4.2 2
lineage6.1.3 2
La2 1
lineage4.1.3 1
La1;lineage4.9 4
lineage4.4.1.2 1
lineage4.1.2;lineage4.9 1
lineage4.1;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.1.2.1;lineage4.4.1 1
lineage2.2.1.2 3
La3;lineage4 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.2.2.2 1
La1.7;lineage3.1;lineage4 1
lineage4.3.2.1 1
lineage4.3.1 1
lineage4.6.5 1
lineage6 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage1.1.1.1 1
La1;lineage4.1.2 1
lineage3.1.3 1
spoligotype Counts
spoligotype Count
None 298
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR8692782 Other lineage4.9 None
SRR28044873 Pre-XDR-TB lineage3 None
ERR3797079 Sensitive lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
ERR3797087 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR8692863 Other lineage2.2;lineage4 None
ERR4796254 Sensitive lineage4.9 None
SRR7069097 Other lineage3.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR7535082 Sensitive lineage4.9 None
SRR18213736 Other lineage3 None
ERR323062 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR323066 Sensitive lineage4.9 None
ERR3283046 Sensitive lineage4.9 None
SRR22048536 Other lineage4.3.3 None
ERR736872 HR-TB lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4818180 Other lineage4.8 gb
ERR1063896 Sensitive None
ERR502474 RR-TB lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR4769554 RR-TB lineage4.9 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR6045191 Sensitive lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR7069800 Other lineage3.1.2.1 None
SRR7240476 Other La1.8.1 None
SRR18909918 Other lineage2.2.1.1 None
ERR4769427 Other La1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR10796620 Other lineage4.1.1.1 None
SRR5341293 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR3675230 Other lineage3;lineage4 None
ERR1063883 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
SRR20969542 Other lineage4.4.2 None
ERR3273109 HR-TB lineage4 None
SRR7069030 Other lineage3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341453 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR11342638 MDR-TB lineage4.4.1.1.1 None
ERR3797047 MDR-TB lineage4.9 None
ERR4769516 Sensitive lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR4033549 Other lineage2.2.2 None
SRR18002994 MDR-TB lineage4.2.2 None
ERR3797046 HR-TB lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR11972367 Sensitive lineage2.2.1 None
ERR4820922 Other lineage4.1.2.1 gb
ERR4820833 Other lineage3;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR8692898 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR4769514 Other La1.3 None
SRR5341456 Other lineage4.9 None
SRR6045312 Other lineage1.1.3.3 None
SRR20970016 Other lineage2.2 None
SRR1183965 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341387 Other lineage4.9 None
SRR6046291 Other lineage3 None
ERR4817060 Other None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR867521 MDR-TB lineage2.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR6398013 Sensitive lineage4.1.2 ca
ERR1063858 HR-TB lineage4.9 None
SRR6855695 Sensitive lineage4.8 None
SRR7236177 Other La1.8.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR1158918 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1173568 Sensitive lineage4.9 None
SRR6044936 Other lineage4.6 None
SRR5341373 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR978765 RR-TB lineage4.8 None
SRR9971088 RR-TB lineage2.2.1 None
SRR11342658 RR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR10315558 Sensitive lineage2.2.1 None
ERR4816610 Other lineage4.3.3 None
SRR18002941 RR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR13180204 Other lineage3 None
ERR4818393 RR-TB lineage3;lineage4 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR5341455 Sensitive lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR9613550 HR-TB lineage4.1.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR10796633 Other lineage4.3.4.2 None
SRR5341310 Other lineage1.1.2 None
ERR6866410 Sensitive lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR18003038 Other lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR7070535 HR-TB lineage4.1.2.1 None
ERR867567 RR-TB lineage3 None
ERR9787256 Other lineage6.1.3 None
SRR14782054 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR8692887 Other None
ERR867554 Other lineage4.3.4.1 None
ERR4819051 Sensitive lineage4.9 None
SRR13888750 Other La2 None
ERR161037 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7496471 Sensitive lineage4 None
ERR4816198 Sensitive lineage4.1.3 None
ERR502473 RR-TB lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR10796595 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR751326 Other lineage4.9 None
SRR10808490 Sensitive lineage2.2.1.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4769552 Sensitive La1.3 None
ERR4596910 Sensitive lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
ERR978766 RR-TB lineage4.8 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR133825 HR-TB La1;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4797193 HR-TB lineage1.1.2 None
SRR14179705 Pre-XDR-TB lineage3 None
SRR5341308 Sensitive lineage4.9 None
SRR9971144 RR-TB lineage2.2.1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797086 Sensitive lineage4.9 None
SRR18002961 Other lineage2.2.1 None
ERR1023236 Other lineage6.1.3 None
ERR1034634 HR-TB lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR5341298 Sensitive lineage4.9 None
SRR6982246 Sensitive lineage4.1.2;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
SRR11342695 MDR-TB lineage4.8 None
SRR8692894 Other lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR9971046 MDR-TB lineage4.8 None
ERR4769418 Other La1.2 None
ERR4769497 Other La1;lineage4.9 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR9971372 MDR-TB lineage4.1.1.1 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR9786639 Sensitive lineage4.8 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR4821325 Other lineage3 None
SRR6046343 Other lineage2.2.1 None
ERR2693252 Sensitive lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR4818904 Other lineage4.8 None
ERR137286 Other lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR1175127 Other lineage2.2.1.2 None
SRR10315556 Sensitive lineage2.2.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR3283028 Other La3;lineage4 None
ERR2229760 Sensitive lineage4.8 dk
SRR19303820 RR-TB lineage4.8 None
ERR2515230 Sensitive lineage4.8 None
ERR502481 RR-TB lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR1159378 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR5341400 Sensitive lineage4.9 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR10796626 Other lineage4.1.2.1 None
ERR10796626 Other lineage4.1.2.1 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4821119 Other lineage4.4.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR702405 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR4769408 Other La1.3 None
ERR176518 Sensitive lineage4.3.4.2.1 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR3675291 Sensitive lineage4.6 gb
SRR16156817 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR8692858 Other lineage4.9 None
SRR8692807 Other lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR4769450 Other lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
DRR188519 Other lineage4.4.2 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR11342643 MDR-TB lineage4.1.1.1 None
ERR978767 RR-TB lineage4.8 None
ERR4829039 RR-TB lineage4.3.1 None
SRR6046848 Other lineage4.6.5 None
ERR9787362 Sensitive lineage6 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
DRR185000 Other lineage1.1.1.1 None
SRR9971065 RR-TB lineage2.2.1 None
ERR473332 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR18002875 MDR-TB lineage2.2.2 None
ERR4769452 Other lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR779852 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR5341299 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR5341469 HR-TB lineage4.9 None
ERR4769555 Sensitive La1.3 None
SRR18002987 Other lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None