Rv0668 - c.-108C>A
Drug resistance types
3 Sensitive
0 RR-TB
21 HR-TB
9 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.9 | 20 |
| lineage2.2.1 | 3 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage2.2 | 3 |
| lineage4.8 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| La3;lineage4.9 | 7 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.9;lineage7 | 1 |
| 1 | |
| M.canetti;lineage2.2 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.5 | 1 |
| La1.7;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 61 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799025 | Other | lineage4.8 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR5535933 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR752229 | Other | lineage4.5 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4769450 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR6359082 | Other | lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None |
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