Rv0668 - c.2289C>T


Drug resistance types
64 Sensitive 2 RR-TB 108 HR-TB 19 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 86 Other
lineage Counts
lineage Count
87
lineage4 36
lineage4.2.1 1
lineage4.9 37
lineage2.2.1.1 5
lineage1.1 1
lineage4.1.2.1 12
lineage2.2.1 22
lineage4.6.4 2
lineage2.2 5
lineage5.2 2
lineage4.6.2.2 4
lineage4.3.3 4
lineage3.1 2
La2 1
lineage4.3.4.2.1 3
lineage4.6.3 2
La1.8.1 3
lineage4.1.2 1
La1 1
lineage3 7
lineage3.1.2 1
lineage6.1.1 2
lineage6 1
La1.2 1
lineage4.3.4.1 2
lineage4.6.1.1 2
lineage4.3.4 2
lineage4.5 2
lineage1.2.2.1 1
lineage4.1.2.1.1 1
lineage4.3.2 1
lineage4.8;lineage4.1 2
lineage4.7 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage2.2.2 1
lineage2 1
La3 1
lineage4.4.1.1 2
lineage2.2.1.2 2
lineage1.2.1.2 1
lineage1.2.1.2.1 1
lineage1.1.1 1
lineage4.1.1.3 3
La1.7.1 1
lineage7;lineage2.2.1.2 1
lineage4.1 3
lineage4.2;La1.7 1
lineage4.9;lineage4.6.3 1
lineage3;lineage2.1 1
lineage4.3 1
lineage4;lineage1.1.2 1
lineage4.1.1 1
lineage4;lineage1.1 1
lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 284
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045952 HR-TB None
SRR6045706 Sensitive lineage4 None
SRR6045233 HR-TB None
SRR6045371 Sensitive lineage4.2.1 None
SRR6045327 HR-TB None
SRR6046253 HR-TB lineage4.9 None
SRR6325442 HR-TB None
SRR6046225 HR-TB None
SRR6046245 Other lineage4.9 None
SRR6046492 Other None
SRR6046362 HR-TB None
SRR6046460 HR-TB None
SRR6046299 HR-TB None
SRR6325444 HR-TB None
SRR6046482 HR-TB None
SRR6046514 HR-TB None
SRR6325448 HR-TB None
SRR6046802 Other lineage4 None
SRR6325447 HR-TB None
SRR6046611 HR-TB lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR3077978 Other lineage1.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4872102 MDR-TB lineage4.6.4 None
ERR4831117 HR-TB None
ERR4831546 HR-TB lineage2.2 None
ERR4872094 MDR-TB lineage5.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4829736 MDR-TB lineage4.3.3 it
ERR323036 HR-TB None
ERR294248 HR-TB None
SRR6982365 Other lineage2.2.1 None
ERR323034 HR-TB lineage3.1 None
ERR294266 HR-TB None
SRR6831950 Other lineage4.3.3 None
ERR5311099 HR-TB None
ERR502943 HR-TB None
ERR502524 HR-TB La2 None
ERR5311081 HR-TB None
ERR5311090 HR-TB None
ERR323038 HR-TB None
ERR323039 HR-TB None
SRR7535086 Other None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323053 HR-TB None
ERR323041 HR-TB None
SRR7796666 Pre-XDR-TB lineage2.2.1 None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR1063858 HR-TB None
ERR323063 HR-TB None
ERR027293 Other None
ERR1034652 Other None
ERR1063862 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR4820794 Sensitive lineage4.6.3 gb
ERR3468738 Other La1.8.1 None
ERR3283040 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3283055 HR-TB None
ERR3445504 HR-TB None
ERR11049174 Other lineage4.1.2 None
ERR3283010 Other La1 None
ERR3283017 HR-TB None
ERR3468544 HR-TB None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363426 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR5908228 Other lineage4.3.3 None
ERR3797023 HR-TB La1.8.1 None
ERR3797043 HR-TB None
ERR3797036 HR-TB None
ERR3797082 Other lineage4.9 None
ERR3797083 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4798504 Other lineage3 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4811030 Sensitive None
ERR3797016 HR-TB None
ERR3797046 HR-TB None
ERR3799304 Other lineage6.1.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3803778 Other lineage6 None
ERR400345 Other lineage4 None
ERR4188350 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR4797588 MDR-TB lineage3 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR5917710 Other lineage4.1.2.1 None
ERR6358991 HR-TB None
ERR6358837 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR702404 HR-TB None
ERR752229 Other lineage4.5 None
ERR736865 HR-TB None
ERR736875 HR-TB lineage4 None
ERR7821210 Sensitive lineage1.2.2.1 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR7821163 Other lineage2.2.1 None
ERR8976043 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786507 Sensitive lineage4.7 None
ERR9119096 Other lineage4.3.3 None
ERR9119508 MDR-TB lineage4.6.4 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786843 Other None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR987722 HR-TB None
ERR990545 Other lineage3 None
ERR987733 RR-TB lineage4.6.1.1 None
ERR9896144 Other lineage3 None
SRR069981 HR-TB lineage2.2.2 None
SRR069989 HR-TB lineage2 None
SRR1162740 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1169249 Other La3 None
SRR1165584 Other lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1167384 Other lineage4 None
SRR1169306 Other None
SRR1172146 Sensitive lineage4.9 None
SRR1172310 HR-TB None
SRR1174897 HR-TB None
SRR1173453 Other lineage4.4.1.1 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180137 Other lineage2.2.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180270 Other lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR1181289 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183144 Other lineage2.2.1 None
SRR13423649 Sensitive lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR1184024 Other lineage2.2.1.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13861146 Sensitive lineage4.9 None
SRR13861288 Other lineage4.9 None
SRR13861261 Sensitive lineage4.9 None
SRR13861305 Other lineage4.9 None
SRR13861386 HR-TB lineage4.9 None
SRR13861302 Sensitive lineage4.9 None
SRR13861322 Other lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR13861399 Other lineage4.9 None
SRR13861381 MDR-TB lineage4.9 None
SRR13861396 HR-TB lineage4.9 None
SRR13861510 Other lineage4.9 None
SRR13861428 Other lineage4.9 None
SRR13861566 Other lineage4.9 None
SRR13861573 Other lineage4.9 None
SRR13861575 Other lineage4.9 None
SRR13861663 Sensitive lineage4.9 None
SRR13861629 RR-TB lineage4.9 None
SRR13861660 Sensitive lineage4.9 None
SRR13861646 Other lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR14066533 Sensitive lineage1.1.1 None
SRR21677867 Sensitive lineage4.1.1.3 None
SRR17658565 Other lineage3 None
SRR1792478 HR-TB La1.7.1 None
SRR18910194 HR-TB lineage2.2 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR1640750 HR-TB None
SRR1791696 Other La1.8.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR6325445 HR-TB None
SRR12708416 Sensitive lineage4.1 None
SRR23961559 Other lineage4.2;La1.7 None
SRR3675464 HR-TB lineage4.1 None
ERR11083153 Sensitive lineage4.6.3 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR3675473 Sensitive lineage4.9 None
ERR1035239 HR-TB None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675482 HR-TB None
ERR161033 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675486 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675229 Other lineage4 None
ERR181744 HR-TB None
ERR176643 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675279 Other None
ERR212001 HR-TB None
SRR3675383 HR-TB None
ERR176740 HR-TB None
SRR3675387 Sensitive None
ERR176751 HR-TB None
SRR3675545 HR-TB None
ERR212034 HR-TB None
ERR212033 HR-TB None
SRR3675574 HR-TB None
ERR212123 Other None
SRR3675558 HR-TB None
SRR3675571 HR-TB None
ERR212121 HR-TB None
ERR161149 Sensitive lineage4.3.4.2.1 mw
ERR4816466 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR4033302 Sensitive lineage2.2.1 None
ERR3275196 Other lineage2.2.1 nl
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR2446566 Other lineage4.1 None
ERR2509673 Other lineage2.2.1 None
ERR2229143 Other lineage4.1.1 None
ERR4819322 Other lineage4;lineage1.1 None
ERR1035138 MDR-TB None
SRR5341456 Other None
ERR2514821 Other lineage2.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR2514552 Sensitive lineage3 None
ERR2514692 Other None
ERR2515228 Other lineage2.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341470 HR-TB None
ERR2693238 HR-TB lineage4.9 None
ERR2446563 Other lineage2.2.1 nl
ERR4821053 Other lineage3 None
SRR6045503 HR-TB None
ERR2693239 HR-TB None
SRR6045526 HR-TB None
SRR6045519 HR-TB None
ERR2660479 Sensitive lineage1.1.2 None
ERR278594 HR-TB None
ERR2693227 Other lineage4.9 None