Rv0668 - c.771C>T
Drug resistance types
58 Sensitive
5 RR-TB
98 HR-TB
13 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
111 Other
lineage Counts
| lineage | Count |
|---|---|
| 94 | |
| lineage2.2.1 | 15 |
| lineage3 | 5 |
| lineage3.1.2 | 2 |
| lineage4 | 39 |
| lineage4.9 | 35 |
| lineage4.8;La3 | 2 |
| lineage4.3.4 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 3 |
| lineage4.1.2.1 | 15 |
| lineage5.2 | 2 |
| lineage4.1 | 2 |
| lineage4.8 | 7 |
| lineage4.1.1 | 2 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 4 |
| lineage6 | 1 |
| lineage6.1.1 | 2 |
| lineage6.3.1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.3.4.1 | 3 |
| lineage2.2 | 4 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1;La3 | 1 |
| lineage1.2.2.2 | 5 |
| lineage4.1.1.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage4.9;La1 | 1 |
| La1.2 | 2 |
| lineage4;lineage3;lineage2.2.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2.2 | 1 |
| La1.8.1 | 2 |
| lineage4.3.3 | 2 |
| lineage4;lineage1.1 | 1 |
| lineage4.7 | 2 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage4.2.1 | 2 |
| lineage4.2.1.1 | 1 |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.4.2 | 1 |
| La1 | 1 |
| lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 293 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798406 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR5336148 | Other | None | ERR4800341 | Other | lineage3 | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4811493 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR702406 | HR-TB | None | ERR245758 | Other | lineage4.9.1 | None | ERR702404 | HR-TB | None | ERR736865 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | ERR7821163 | Other | lineage2.2.1 | None | ERR736867 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786604 | Other | None | ERR9786569 | Other | lineage4.8 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9896144 | Other | lineage3 | None | SRR1169194 | Other | None | SRR1172310 | HR-TB | None | SRR1172234 | Other | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1174897 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1203934 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12416824 | HR-TB | None | SRR17658572 | Sensitive | lineage1.1.2 | None | SRR16156832 | RR-TB | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | SRR25827682 | Other | None | SRR20970016 | Other | lineage2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR11081258 | Other | lineage4.8 | None | ERR11068570 | Other | lineage4 | None | ERR11081257 | Other | lineage4.8 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR8692825 | Other | lineage4.9 | None | SRR21733085 | Sensitive | lineage1.2.2.2 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR23961549 | Other | La1.2 | None | SRR25827605 | Pre-XDR-TB | lineage4;lineage3;lineage2.2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR176793 | Other | lineage4.1.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815434 | Sensitive | lineage4.2.2 | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675502 | Other | None | SRR3675221 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675236 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675311 | Other | None | ERR176651 | HR-TB | None | ERR176740 | HR-TB | None | ERR181887 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | SRR3675456 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675510 | Other | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | SRR3675550 | Other | None | ERR4817037 | Other | lineage4.9 | None | ERR4817060 | RR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | SRR3675572 | Other | None | ERR4816585 | Other | lineage2.2 | None | SRR3675574 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | SRR5341242 | Sensitive | lineage1.2.2.2 | in | ERR4815815 | Sensitive | lineage4 | None | ERR4817735 | Other | lineage4.8 | None | SRR7496472 | Other | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR1035162 | Other | None | ERR4818021 | Other | La1.8.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR4818615 | Other | None | SRR5341456 | Other | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR2514692 | Other | None | SRR5341418 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | ERR1023509 | Other | None | SRR5341302 | HR-TB | None | ERR4819933 | Other | lineage4.9 | None | SRR5341333 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046210 | Other | lineage4 | None | SRR5431730 | Other | La1.8.1 | None | SRR5341470 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | ERR4822101 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR6046141 | Other | lineage4.9 | None | ERR4821578 | Other | lineage4.1.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6044790 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046066 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045399 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046824 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046305 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046540 | HR-TB | None | ERR4814631 | Sensitive | lineage1.2.2.2 | gb | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4799967 | Sensitive | lineage1.2.2.2 | in | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831117 | HR-TB | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR4816684 | Sensitive | lineage1.2.2.2 | gb | SRR6789626 | Other | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR6785227 | Other | lineage2.2.1 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6785497 | Sensitive | lineage4.3.3 | None | ERR502889 | Other | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR7496517 | Other | None | SRR7585435 | Other | lineage4.9 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR323043 | HR-TB | None | ERR323053 | HR-TB | None | ERR11466499 | Other | lineage4.3.4.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR067681 | HR-TB | None | ERR1063862 | HR-TB | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR11049020 | Other | lineage4.8 | None | ERR1063858 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1063859 | HR-TB | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283010 | Other | La1 | None | ERR133986 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3470647 | Other | lineage3 | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR3445503 | HR-TB | None | ERR363447 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3509850 | MDR-TB | lineage4.3.4.2.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR3797043 | HR-TB | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797038 | Sensitive | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797058 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR403298 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4407463 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796577 | MDR-TB | None | ERR4797037 | Pre-XDR-TB | lineage3.1.2 | None |
|---|
