Rv2754c - c.156C>G

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
8 Sensitive 3 RR-TB 20 HR-TB 5 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 25 Other
lineage Counts
lineage Count
lineage4.9 32
1
lineage4.9;lineage6.3 1
lineage2.2.1 3
La1.7;M.canetti;lineage4.9 1
La1.7;lineage4.9 4
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
lineage4 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.2.1.2 2
lineage4.9;lineage7 2
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7 1
M.canetti;lineage4.9 3
lineage4.1.2 1
lineage3 1
lineage4.2;lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La2;lineage2.2 1
La2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 62
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675461 RR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR6358991 HR-TB None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR26399265 Other lineage2.2.1 None
ERR3797046 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR4810624 HR-TB lineage2.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR5311094 HR-TB lineage4.9 None
SRR29017081 Sensitive lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR181824 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR1175127 Other lineage2.2.1.2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
ERR4830353 Other La1.7 None
SRR5341330 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR29231479 RR-TB lineage4.9 None
ERR212138 HR-TB lineage4.9 None
SRR29096387 Sensitive M.canetti;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675441 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR9970978 Sensitive lineage4.1.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR26331611 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR270657 Sensitive lineage3 None
SRR11662690 HR-TB lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR387051 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None