Rv3245c - c.-137T>C
Drug resistance types
11 Sensitive
3 RR-TB
28 HR-TB
12 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 34 |
| lineage3.1.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1 | 4 |
| M.canetti;lineage4.9 | 4 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La1.7;lineage4.9 | 8 |
| La3;lineage4 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La3;lineage4.9 | 7 |
| lineage4.8 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.1.2.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage5.2 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage2.2 | 4 |
| La1.2.BCG | 1 |
| lineage3 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| 1 | |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4 | 1 |
| La2;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.2.2 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769452 | Other | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR13266892 | MDR-TB | lineage3.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR14782054 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR29096150 | Other | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR3675222 | Other | La1.7 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR5535933 | Other | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR26399491 | Sensitive | lineage1.1.1.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR22251329 | Other | lineage2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR5341330 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR26399255 | Sensitive | lineage2.2.1 | None |
|---|
