Rv1630 - c.684C>G


Drug resistance types
14 Sensitive 38 RR-TB 72 HR-TB 50 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 90 Other
lineage Counts
lineage Count
La1.7;lineage4.9 3
lineage3 6
lineage3.1.2.1 1
lineage2.2 3
lineage4.3.1;lineage4.9;lineage6 1
M.canetti;lineage2.1;lineage4.9 21
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.6.5 1
lineage4.3.4.2.1 2
lineage2.2.1 10
lineage4.8 14
lineage4.9 67
lineage4.3.2.1 2
lineage4.1.1.3 1
lineage1.1.2;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.9;lineage9 2
lineage4.6.1.2 3
lineage4.8;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.1.2.1 10
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage2.1;lineage4.9 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage3.1 1
La1.7;M.canetti;lineage4.9 2
lineage4.6.3;lineage4.9 2
3
lineage4.4.1.1 3
La1.8.1 5
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage4.5 1
lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1.2 2
lineage4.3.3 2
La3;M.canetti;lineage4.9 2
lineage4 2
La1.2 1
lineage2.2;lineage4 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 2
La2;lineage4.9;lineage9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage4.9 1
lineage4.6.4;lineage4.9 1
lineage4.3.2;lineage4.9 1
lineage3.1;lineage9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.3.4 1
M.canetti;lineage2.1;lineage4 1
lineage2.2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.7 1
M.canetti;lineage2.2 1
La1.2;La1.8.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.4.2 1
lineage3.1.1;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.4.1.2 1
lineage4.9;lineage7 1
lineage6.1.1 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
La1;lineage4.9 1
lineage4.3.4.2 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.3.4.1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 271
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675501 Other La1.7;lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR7801176 RR-TB lineage4.6.5 None
ERR163965 Sensitive lineage4.3.4.2.1 mw
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR978752 Other lineage4.8 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR176741 Other lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4816551 HR-TB lineage4.1.1.3 None
SAMEA3501065 RR-TB lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR5341330 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR2228890 Other lineage4.8;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797062 RR-TB lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR4769452 Other lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR6046485 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR987722 MDR-TB None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR1162864 Other lineage4.1.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR17832802 HR-TB lineage3 None
SRR6046385 Sensitive lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR752229 Other lineage4.5 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR1175127 Other lineage2.2.1.2 None
SRR6044875 Sensitive lineage4.9 None
ERR4815079 RR-TB lineage3 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1735596 RR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR6045053 Other lineage4 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR7240476 Other La1.8.1 None
ERR4769427 Other La1.2 None
ERR2693228 RR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR978762 Other lineage4.8 None
ERR2446566 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1791696 Other La1.8.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR29096150 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR2229143 RR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR6046594 Sensitive lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR6359082 Other lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR978757 RR-TB lineage4.8 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046878 Other lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR4817915 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29096410 Other lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR1172310 HR-TB lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR8665994 Other lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR1162740 Other lineage4.1.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1166821 Other lineage4.1.2.1 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675269 RR-TB lineage4.9 None
ERR4830353 Other La1.7 None
ERR6359066 HR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR14782054 Other lineage4.9 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4821704 Other lineage4.3.3 None
SRR22424787 Sensitive lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
DRR188519 Other lineage4.4.2 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR323037 Other lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3275215 RR-TB lineage4.1.2.1 nl
ERR126597 HR-TB lineage4.4.1.2 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR176751 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR978735 Other lineage4.8 None
ERR4799513 HR-TB lineage2.2 None
SRR21732954 Sensitive lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736831 Other lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SAMEA3501052 RR-TB lineage4.8 None
SRR13861400 Other lineage4.9 None
SRR13861553 Other lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR4817069 RR-TB None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2509673 Other lineage2.2.1 None
ERR4769497 Other La1;lineage4.9 None
SRR6044815 Other lineage4.9 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR5431730 Other La1.8.1 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
ERR9786639 Sensitive lineage4.8 None
ERR2446118 Other lineage4.1.2.1 nl
SRR6045002 RR-TB lineage4.9 None
SRR1640750 Other None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR3797023 HR-TB La1.8.1 None
ERR4798823 HR-TB lineage4 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None