lineage | Count |
---|---|
lineage4.9 | 38 |
lineage2;lineage4 | 1 |
lineage2.2 | 3 |
lineage2.2.1 | 7 |
1 | |
lineage4.5 | 1 |
lineage4 | 3 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage4.8 | 2 |
lineage4.6.1.1 | 2 |
lineage2.2.1.2 | 2 |
lineage4.9;lineage7 | 1 |
lineage4.3.2.1 | 1 |
lineage2.1;lineage4.1.4;lineage4.9 | 1 |
La1;lineage4.9 | 1 |
lineage4.9;lineage6.1.3 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage4.1.1.3 | 1 |
La1.2;La1.8.1 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 70 |
ID | Drug resistance | Lineage | Country iso2 | ERR4769452 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR6046485 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4819241 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR5341330 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR14782054 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR7496471 | Sensitive | lineage4 | None |
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