Rv0006 - c.1680G>C


Drug resistance types
52 Sensitive 2 RR-TB 89 HR-TB 4 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 58 Other
lineage Counts
lineage Count
lineage2.2.1 13
lineage4 48
91
lineage2.2.1.2 2
lineage2.2 6
lineage4.4.1.1.1 1
lineage2.2.1.1 1
lineage4.9 23
lineage4.2.1 1
La1.8.1 2
La1.7.1 1
lineage7;lineage2.2.1.2 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage1.2.1.1 1
lineage3.1.3 1
lineage4.1.1.2 1
lineage3 2
lineage4.2.1.1 1
lineage4.1.2 1
lineage4.3.4.2.1 1
lineage4.3.2.1 1
lineage4.4.1.2 1
lineage4.4.2 1
La1 1
lineage4;lineage3.1 1
lineage2.2.2 1
lineage4.3.4 1
lineage4.5 1
lineage1.1.3.1 1
lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 210
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10315551 Sensitive lineage2.2.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR1140724 HR-TB lineage2.2.1 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1158918 Sensitive lineage4 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1181237 Sensitive lineage2.2 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR14782405 HR-TB None
SRR14801749 Sensitive None
SRR1791747 Other La1.8.1 None
SRR1792478 HR-TB La1.7.1 None
SRR19295647 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR20632814 Sensitive lineage4 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR26399239 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
ERR158583 HR-TB None
ERR176779 HR-TB None
ERR176778 HR-TB None
SRR3675502 Other None
SRR3675234 Other None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4814734 Other lineage1.2.1.1 None
ERR4816466 HR-TB None
SRR3675270 HR-TB None
ERR181887 HR-TB None
ERR212125 HR-TB lineage4 None
ERR212138 HR-TB lineage4 None
ERR181824 HR-TB lineage4 None
SRR3675246 Sensitive lineage4 None
ERR176651 HR-TB None
SRR3675312 HR-TB lineage4 None
SRR3675550 Other None
ERR4816656 HR-TB None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818252 Other lineage4.1.1.2 None
ERR4818110 Sensitive lineage4.9 None
ERR1035162 Other None
ERR4818607 Sensitive lineage4.9 None
ERR4819051 Other lineage4 None
ERR4818929 HR-TB None
ERR3275709 HR-TB lineage3 nl
SRR5341453 Sensitive None
SRR5341412 Pre-XDR-TB lineage3 None
ERR6359082 Other lineage4.9 None
ERR4819623 Sensitive lineage4.9 None
SRR5341418 Other None
ERR1023509 Other None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693238 HR-TB lineage4.9 None
ERR2693231 Other None
SRR6045450 Other lineage4.9 None
ERR2693230 Other None
ERR2693254 Other None
SRR6045555 HR-TB None
ERR2693257 Other None
ERR4821655 Sensitive lineage4 None
SRR5535933 HR-TB None
SRR6045519 HR-TB None
ERR2660539 Other lineage4.9 None
SRR6045892 Sensitive None
SRR6046133 HR-TB None
ERR2693232 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6044780 Other lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6045053 Other None
SRR6044838 Other lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045010 Other lineage4 None
SRR6045399 Other None
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6046210 Other lineage4 None
SRR6046482 HR-TB None
SRR6046362 HR-TB None
ERR2851356 Sensitive lineage4.9 None
SRR6046460 HR-TB None
SRR6046253 HR-TB lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6046824 HR-TB None
SRR6046492 Other None
SRR6046594 HR-TB lineage4 None
SRR6046878 HR-TB lineage4 None
ERR4831117 HR-TB None
SRR6511621 HR-TB None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR9970980 Other lineage4.1.2 None
SRR6832249 Other lineage2.2.1 None
ERR502510 Sensitive lineage4 None
SRR6832787 RR-TB lineage2.2.1 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR502889 Other None
SRR7496471 Sensitive None
SRR7535082 Sensitive lineage4 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971112 Other lineage2.2.1 None
ERR323108 HR-TB lineage4 None
ERR323045 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323066 Sensitive lineage4 None
DRR188519 Other lineage4.4.2 None
ERR067681 HR-TB None
ERR323107 Other lineage4 None
ERR1034634 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR067699 HR-TB lineage4 None
ERR1063855 Other lineage4 None
ERR1063839 HR-TB lineage2.2 None
ERR1034652 Other None
ERR1035122 Sensitive None
ERR1063859 HR-TB None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR1063857 HR-TB None
ERR1063896 Sensitive None
ERR133825 Sensitive lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283010 Other La1 None
ERR133986 HR-TB None
ERR137286 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283025 HR-TB None
ERR3283014 HR-TB None
ERR3283021 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283028 Other None
ERR3283024 Other None
ERR3283040 HR-TB None
ERR3283031 HR-TB None
ERR3283032 HR-TB None
ERR3283047 HR-TB None
ERR3283055 HR-TB None
ERR3445503 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3439432 Other None
ERR3797014 Other None
ERR3797015 HR-TB None
ERR3797036 HR-TB None
ERR3797046 HR-TB None
ERR3797017 Other None
ERR3797065 MDR-TB lineage4 None
ERR3797048 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR3797044 Other None
ERR3797063 HR-TB None
ERR3797061 Other None
ERR405209 Sensitive lineage4 None
ERR3797080 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797086 Other lineage4.9 None
ERR3797087 Sensitive lineage4 None
ERR4024991 Other None
ERR403298 HR-TB lineage4 None
ERR4769452 HR-TB None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR473332 Other lineage4 None
ERR4188247 HR-TB None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4796254 Sensitive lineage4 None
ERR4769521 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4796577 MDR-TB None
ERR4796929 Sensitive lineage4 None
ERR4798099 Other None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4799025 Pre-XDR-TB None
ERR4798406 HR-TB None
ERR4810624 HR-TB lineage2.2 None
ERR4799378 Sensitive lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR4811493 HR-TB None
ERR6866022 Other None
ERR5987364 Pre-XDR-TB lineage2.2.2 None
ERR6359066 HR-TB lineage4 None
ERR6866410 Sensitive None
ERR6866807 HR-TB lineage4 None
ERR6866639 Other None
ERR736848 HR-TB None
ERR736834 Sensitive lineage4 None
ERR736817 HR-TB lineage4.3.4 None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR736875 HR-TB lineage4 None
ERR752229 Other lineage4.5 None
ERR751326 Sensitive lineage4 None
ERR9119669 HR-TB None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9786986 HR-TB lineage4.1.2.1 None