lineage | Count |
---|---|
lineage2.2 | 3 |
lineage2.2.1 | 6 |
lineage4.3.4 | 1 |
lineage4.9 | 45 |
23 | |
lineage4 | 13 |
lineage4;lineage2 | 1 |
lineage4.8 | 1 |
lineage4.1 | 1 |
lineage4.3.3 | 1 |
lineage1.1.1 | 1 |
lineage4.2.1 | 1 |
lineage4.5 | 2 |
La1.2 | 1 |
lineage2.2.2 | 1 |
lineage3 | 1 |
La1.8.1 | 1 |
lineage6 | 1 |
lineage2.2.1.2 | 2 |
lineage4.9;lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 110 |
ID | Drug resistance | Lineage | Country iso2 | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR212123 | Other | None | SRR5341373 | HR-TB | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR6045217 | Other | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046046 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046385 | Other | lineage4.9 | None | ERR4828628 | MDR-TB | lineage4.5 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6046492 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR4831117 | HR-TB | None | ERR3283055 | HR-TB | None | ERR387051 | HR-TB | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4811493 | HR-TB | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR752229 | Other | lineage4.5 | None | SRR11462861 | Other | La1.8.1 | None | ERR9787336 | Other | lineage6 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14782405 | HR-TB | None | SRR16149129 | MDR-TB | lineage4.2.2.1 | None |
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