Rv3457c - c.615C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
19 Sensitive
4 RR-TB
26 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 49 |
| lineage1.1.1 | 1 |
| La3;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| lineage4 | 1 |
| lineage4.9;lineage7 | 4 |
| lineage6 | 1 |
| lineage2.2.1 | 7 |
| lineage4.3.3 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.1.2.1 | 2 |
| 1 | |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.8 | 2 |
| lineage4.3.4 | 1 |
| lineage4.5 | 2 |
| lineage4.9;lineage9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.8.1 | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| lineage3 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 91 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046385 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR161037 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR9787336 | RR-TB | lineage6 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4796577 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR14782054 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR4828628 | HR-TB | lineage4.5 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR7240033 | Other | La1.8.1 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR736831 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR387051 | Other | lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None |
|---|
