Rv0006 - p.Ala90Ser
Drug resistance types
87 Sensitive
2 RR-TB
44 HR-TB
7 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| 32 | |
| lineage4.9 | 55 |
| lineage4 | 52 |
| lineage4.1.2 | 1 |
| lineage2.2.1.1 | 3 |
| lineage2.2.1 | 12 |
| lineage4.1 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage2.2 | 4 |
| lineage4.1.2.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage4.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.1 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 187 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6511621 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR294266 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1034634 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3797015 | HR-TB | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR405209 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR6359045 | HR-TB | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6866022 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9634265 | Sensitive | None | ERR7821163 | Other | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR21677892 | Sensitive | lineage4.1.1.3 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3675246 | Sensitive | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675571 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341313 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341315 | Sensitive | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5535933 | HR-TB | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045892 | Sensitive | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046397 | Other | None |
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