EBG00000313325 - n.197T>C
Drug resistance types
8 Sensitive
0 RR-TB
10 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 2 |
| lineage4.4.1.1.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.9 | 22 |
| lineage1.2.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.9;lineage7 | 1 |
| La1.7 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2 | 3 |
| lineage2.2.1 | 1 |
| lineage3 | 1 |
| lineage4.8 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.3 | 1 |
| lineage4.4.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1791725 | Other | La1.8.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | SRR14782054 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR3675389 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR3675222 | Other | La1.7 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4799025 | Other | lineage4.8 | None | ERR4769457 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4769452 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6359082 | Other | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR1063855 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | DRR188519 | Other | lineage4.4.2 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None |
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