Rv3245c - c.-341C>G


Drug resistance types
6 Sensitive 22 RR-TB 40 HR-TB 40 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 49 Other
lineage Counts
lineage Count
lineage4.9 51
lineage4.8 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La2;lineage4.9 2
lineage6.1.1 2
lineage3.1.2.2 1
La3;lineage4.3.4 1
lineage4.9;lineage9 2
lineage4.3.2.1 1
La1.7;M.canetti;lineage4.9 3
La2;lineage4.9;lineage9 1
lineage4.6.2.2 2
lineage2.2.1.1 4
lineage1.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.9;lineage7 5
lineage4.2;lineage4.8.1;lineage4.9 2
lineage3 3
M.canetti;lineage4.2 1
lineage2.2.1 4
M.canetti;lineage4.9 2
lineage4.2;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4 3
La1.7;lineage4.9 8
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage4.6.4;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.4.1 1
lineage4.1.1.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.7;lineage4.9;lineage7 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 1
La1.2;La1.8.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.6.3;lineage4.9 2
lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage4.9 1
La1.7;lineage4.3.4.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.2.1.2 1
La1.7 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage2.1;lineage4.9;lineage7 1
lineage4.1.2 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.9;lineage6.1.3 1
lineage4.1.2.1 2
lineage4.3.2;lineage4.9 1
lineage2.2 1
lineage2.2.1.2;lineage7 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage6.1.3 1
La2;lineage2.2 1
La1.8.1 1
spoligotype Counts
spoligotype Count
None 158
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1172310 MDR-TB lineage4.9 None
ERR4816151 Other lineage4.8 None
ERR387051 RR-TB lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR9119669 MDR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
SRR5341308 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR3801503 Other lineage4.6.2.2 None
SRR1181091 Other lineage2.2.1.1 None
SRR14066533 RR-TB lineage1.1.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4797184 HR-TB lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR28351339 MDR-TB lineage4 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
SRR3675270 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6045217 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR11466445 Sensitive lineage4.3.4.1 None
ERR11466044 Other lineage4.1.1.3 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045555 Other lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR3273109 HR-TB lineage4 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR926164 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR3675222 Other La1.7 None
ERR9786711 Other lineage4.6.2.2 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR1063896 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR28045681 Sensitive lineage3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR4798099 HR-TB lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR926165 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR14782054 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR6045219 HR-TB lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR6511621 HR-TB lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR2446566 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR1183111 HR-TB lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR4830353 HR-TB La1.7 None
SRR12416842 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR6359082 Other lineage4.9 None
ERR926155 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
ERR6866807 RR-TB lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR6046878 Other lineage4.9 None
ERR4798504 RR-TB lineage3 None
SRR1791747 Other La1.8.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6044942 HR-TB lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None