Rv3245c - c.808_810delAGGinsCC
Drug resistance types
11 Sensitive
2 RR-TB
53 HR-TB
6 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 82 |
| lineage1.1.2 | 1 |
| lineage3 | 2 |
| lineage4 | 3 |
| lineage2.2.1 | 7 |
| lineage4.6.2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.6;lineage4 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage5.2 | 2 |
| lineage4.3.4 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| 1 | |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 112 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341384 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR926155 | Other | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | SRR28351554 | Other | La1.6;lineage4 | None | ERR3797029 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1159378 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675312 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR751326 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR502511 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR1063896 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR926165 | Other | lineage4.9 | None |
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