lineage | Count |
---|---|
lineage1.1.1 | 1 |
lineage3 | 2 |
lineage2.2.1 | 2 |
45 | |
lineage4.9 | 32 |
lineage4 | 7 |
lineage2.2 | 5 |
lineage4.4.2 | 1 |
La1.2 | 1 |
lineage4.1.2.1 | 1 |
lineage4.8 | 2 |
lineage2.2.1.2 | 2 |
lineage4.9;lineage2.2 | 1 |
lineage2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 105 |
ID | Drug resistance | Lineage | Country iso2 | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693239 | HR-TB | None | SRR5341456 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045053 | Other | None | SRR5535933 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6325442 | HR-TB | None | SRR6046046 | Other | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311081 | HR-TB | None | ERR294248 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | SRR7496471 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR323041 | HR-TB | None | ERR323063 | HR-TB | None | DRR188519 | Other | lineage4.4.2 | None | ERR067712 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3445504 | HR-TB | None | ERR1063857 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR4188350 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4769521 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6358837 | HR-TB | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR8976043 | HR-TB | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1175513 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675270 | HR-TB | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818561 | HR-TB | lineage4 | None |
---|