lineage | Count |
---|---|
lineage4.9 | 10 |
lineage2.2.1.2 | 1 |
lineage2.2.1 | 3 |
1 | |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
La1.7;lineage4.9 | 2 |
lineage4.9;lineage9 | 2 |
lineage4.9;lineage6.3 | 2 |
La2;lineage4.9 | 1 |
La2;lineage4.9;lineage9 | 1 |
lineage2.2 | 1 |
La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage4.3.2;lineage4.9 | 1 |
lineage4 | 1 |
La3;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 29 |
ID | Drug resistance | Lineage | Country iso2 | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR26399265 | Other | lineage2.2.1 | None | ERR987722 | MDR-TB | None | SRR29096410 | Other | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR1172234 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR5535933 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR29016901 | Other | La3;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None |
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