Rv1173 - c.2475A>G
Drug resistance types
15 Sensitive
3 RR-TB
129 HR-TB
11 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
51 Other
lineage Counts
| lineage | Count |
|---|---|
| 127 | |
| lineage4.3.3 | 5 |
| lineage4 | 19 |
| lineage4.4.1.1 | 4 |
| lineage4.9 | 16 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1 | 8 |
| lineage3.1 | 4 |
| lineage4.5 | 1 |
| lineage2 | 3 |
| lineage2.2 | 3 |
| lineage9;lineage3.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.1.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1.2.1 | 5 |
| lineage3 | 1 |
| lineage1.1 | 1 |
| La1 | 2 |
| La1.8.1 | 1 |
| La1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 216 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173384 | Other | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1173484 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13861636 | Sensitive | lineage4.9 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR25827682 | Other | None | SRR6325445 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR161033 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675236 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4816999 | Other | None | SRR3675383 | HR-TB | None | SRR3675311 | Other | None | SRR3675456 | HR-TB | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4817735 | Other | lineage4.8 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4818615 | Other | None | ERR2446566 | Other | lineage4.1 | None | ERR234659 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341456 | Other | None | SRR5341387 | Other | lineage4 | None | ERR4819280 | Sensitive | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | SRR2101778 | Sensitive | lineage4.4.1.1 | None | SRR6045503 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341330 | HR-TB | None | SRR5341469 | Other | lineage4 | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045555 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045399 | Other | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046397 | Other | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6789626 | Other | None | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR323036 | HR-TB | None | SRR6982553 | Sensitive | lineage4.4.1.1 | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR323043 | HR-TB | None | ERR3283032 | HR-TB | None | ERR323063 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR1063862 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063858 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797071 | Other | lineage4.9 | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4407463 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR702406 | HR-TB | None | ERR736839 | Other | None | ERR736835 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736856 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | SRR1167055 | Other | lineage4.1.2.1 | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | SRR069989 | HR-TB | lineage2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1172728 | MDR-TB | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172817 | HR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172857 | MDR-TB | None |
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