EBG00000313339 - n.426C>T


Drug resistance types
11 Sensitive 5 RR-TB 46 HR-TB 27 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 49 Other
lineage Counts
lineage Count
lineage4.9 61
lineage4.2;lineage4.6.3;lineage4.9.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.1.2.1 6
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage1.1.3.1 1
lineage4.5 1
La1.2 1
lineage2.2.1 9
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.3.4.2 3
La1;lineage4.9 3
lineage4 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage1.1.2 2
lineage4.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.2.1.2 2
La1;lineage4.1.2 1
lineage4.4.2 1
lineage4.8 2
lineage4.3.2 2
lineage4.1.1 1
lineage3.1.3 1
La1.7.X-unk4;lineage4.9 1
lineage4.6.1.2 1
lineage2.2 3
lineage4.3.4.1 2
lineage4.3.2.1 1
lineage4.3.3 3
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.1;lineage4.9;lineage6 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.2.1.1 3
lineage4.9;lineage7 1
M.canetti;lineage4.2 1
La1.2.BCG 1
M.canetti;lineage4.9;lineage9 1
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.1.2 1
lineage4.3.4.2.1 1
La1;lineage2;lineage4.9 1
lineage4.9;lineage6.1.3 1
La1.2;La1.8.1 1
M.canetti;lineage1 1
lineage4.1.1.3 1
La1.6 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
spoligotype Counts
spoligotype Count
None 141
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR736834 HR-TB lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR5341299 HR-TB lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR1035300 HR-TB lineage4.1.2.1 br
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR752229 Other lineage4.5 None
ERR4797474 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4769427 Other La1.2 None
ERR1213874 MDR-TB lineage2.2.1 kr
SRR6046492 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6045217 Other lineage4.9 None
ERR1035317 RR-TB lineage4.3.4.2 br
ERR926156 Other lineage4.9 None
ERR1035295 MDR-TB lineage4.1.2.1 br
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1181251 Other lineage2.2.1 None
ERR1063883 HR-TB lineage4.9 None
SRR1181328 Other lineage2.2.1 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4797193 HR-TB lineage1.1.2 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR10809074 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR133825 HR-TB La1;lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4769452 Other lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR926155 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR1035299 MDR-TB lineage4.1.2.1 br
DRR188519 Other lineage4.4.2 None
ERR971389 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
ERR9786639 Sensitive lineage4.8 None
ERR4769497 Other La1;lineage4.9 None
SRR3675502 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
SAMN02585910 RR-TB lineage2.2.1 None
ERR1035316 MDR-TB lineage4.3.2 br
ERR1035354 MDR-TB lineage4.1.1 br
SRR1175127 Other lineage2.2.1.2 None
ERR2513121 Sensitive lineage3.1.3 None
SRR10808668 Other lineage2.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR1035296 HR-TB lineage4.9 br
ERR2124083 HR-TB lineage4.6.1.2 None
ERR4188247 HR-TB lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR926162 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR1035297 MDR-TB lineage4.3.4.1 br
SRR14782054 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR4769457 Other lineage4.9 None
ERR926160 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR1035293 MDR-TB lineage4.3.4.2 br
SRR5341461 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
ERR1213875 Sensitive lineage4.3.3 de
ERR926159 Sensitive lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR5341453 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR14782405 HR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797184 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR1035315 Pre-XDR-TB lineage4.3.4.1 br
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1915487 Other La1.2.BCG None
ERR4811493 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR736856 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR1063896 HR-TB None
ERR779852 HR-TB lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR926165 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR124636 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063846 HR-TB lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR1035122 HR-TB lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR1035301 MDR-TB lineage4.3.2 br
ERR11268039 Other La1.6 None
SRR1181091 Other lineage2.2.1.1 None
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR5341467 Other lineage4.9 None
ERR4769450 Other lineage4.9 None