EBG00000313339 - n.426C>T
Drug resistance types
55 Sensitive
7 RR-TB
38 HR-TB
24 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| 48 | |
| lineage4 | 43 |
| La1.8.1 | 2 |
| La1.2 | 2 |
| lineage4.9 | 8 |
| lineage1.1.2 | 2 |
| lineage2.2.1.1 | 5 |
| lineage2.2 | 3 |
| lineage1.1.3.1 | 1 |
| lineage4.5 | 2 |
| lineage4.8 | 3 |
| lineage2.2.1 | 22 |
| lineage2.2.1.2 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.2.1 | 2 |
| lineage3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.4.2 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.3.4.1 | 3 |
| lineage4.1.2.1 | 6 |
| lineage4.3.2 | 3 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.6.1.2;lineage4.3.3 | 1 |
| lineage4.3.3;lineage2.2.1 | 1 |
| lineage4.3.3;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 189 |
Geographic prevalence
Country level data for this variant is available for 31 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797046 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4024991 | Other | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR4188247 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769427 | Other | La1.2 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769450 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4797264 | Sensitive | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR4797474 | Other | None | ERR4797849 | XDR-TB | lineage2.2.1.1 | in | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR6866022 | Other | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR752229 | Other | lineage4.5 | None | ERR751326 | Sensitive | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180270 | Other | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR3675270 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4815786 | Sensitive | lineage3 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR158583 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR2179727 | Sensitive | lineage4.5 | cn | SRR3675550 | Other | None | ERR4815550 | Other | lineage4 | None | SRR3675502 | Other | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | ERR2124081 | MDR-TB | lineage4.6.1.2 | None | SRR5341366 | Sensitive | lineage4 | None | SRR4033708 | Sensitive | lineage4.4.1.1.1 | za | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2446566 | Other | lineage4.1 | None | ERR1035162 | Other | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341453 | Sensitive | None | SRR5341425 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR4819368 | Sensitive | lineage4.8 | gb | SRR5341298 | Sensitive | lineage4 | None | SRR5341418 | Other | None | ERR4819660 | Sensitive | None | SRR5341456 | Other | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR1023509 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5535933 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR2652959 | Sensitive | lineage4.4.1.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR2660539 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6046299 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045045 | Other | lineage2.2.1 | None | ERR4830540 | RR-TB | lineage2.2.1 | None | SRR6046362 | HR-TB | None | SRR6046492 | Other | None | SRR6511621 | HR-TB | None | SRR6397441 | Other | lineage4 | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR502889 | Other | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323066 | Sensitive | lineage4 | None | SRR9971059 | RR-TB | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323107 | Other | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323085 | Sensitive | lineage4 | None | ERR067681 | HR-TB | None | ERR027293 | Other | None | ERR1034652 | Other | None | ERR067699 | HR-TB | lineage4 | None | ERR1035296 | HR-TB | lineage4.9 | br | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | ERR1035318 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR1035356 | Pre-XDR-TB | lineage4.3.4.2 | br | ERR1035122 | Sensitive | None | ERR1035293 | MDR-TB | lineage4.3.4.2 | br | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR1035301 | MDR-TB | lineage4.3.2 | br | ERR1035315 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR1035317 | RR-TB | lineage4.3.4.2 | br | ERR1035316 | MDR-TB | lineage4.3.2 | br | ERR1035354 | MDR-TB | lineage4.1.1 | br | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR1213889 | MDR-TB | lineage4.3.4.2.1 | rw | ERR1213874 | MDR-TB | lineage2.2.1 | kr | ERR1213928 | MDR-TB | lineage4.3.3 | pe | ERR1213875 | Other | lineage4.3.3 | de | ERR1213912 | HR-TB | lineage4.1.2.1 | gn | ERR1213931 | MDR-TB | lineage4.6.1.2;lineage4.3.3 | pe | ERR1213930 | Other | lineage4.3.2 | pe | ERR1213939 | MDR-TB | lineage4.3.3;lineage2.2.1 | pe | ERR133986 | HR-TB | None | ERR1213937 | Sensitive | lineage4.1.2.1 | pe | ERR1213940 | RR-TB | lineage4.3.3;lineage4.1.2.1 | pe | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None |
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