EBG00000313339 - n.426C>T


Drug resistance types
55 Sensitive 7 RR-TB 38 HR-TB 24 MDR-TB 9 Pre-XDR-TB 1 XDR-TB 55 Other
lineage Counts
lineage Count
48
lineage4 43
La1.8.1 2
La1.2 2
lineage4.9 8
lineage1.1.2 2
lineage2.2.1.1 5
lineage2.2 3
lineage1.1.3.1 1
lineage4.5 2
lineage4.8 3
lineage2.2.1 22
lineage2.2.1.2 2
lineage4.6.1.1 2
lineage4.2.1 2
lineage3 1
lineage1.2.1.1 1
lineage7;lineage2.2.1.2 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.6.1.2 2
lineage4.4.1.1.1 1
lineage3.1.3 1
lineage4.1 2
lineage4.4.1.1 1
lineage4.2.1.1 1
lineage4.1.2 2
lineage4.3.2.1 1
lineage4.3.3 4
lineage4.4.2 1
lineage4.3.4.2 4
lineage4.3.4.1 3
lineage4.1.2.1 6
lineage4.3.2 3
lineage4.1.1 1
lineage4.3.4.2.1 2
lineage4.6.1.2;lineage4.3.3 1
lineage4.3.3;lineage2.2.1 1
lineage4.3.3;lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 189
Geographic prevalence
Country level data for this variant is available for 31 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797046 HR-TB None
ERR403298 HR-TB lineage4 None
ERR4024991 Other None
ERR3797073 HR-TB La1.8.1 None
ERR4188247 HR-TB None
ERR4769452 HR-TB None
ERR4769427 Other La1.2 None
ERR4769497 HR-TB La1.2 None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4797264 Sensitive None
ERR4796929 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4796254 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4798406 HR-TB None
ERR4797474 Other None
ERR4797849 XDR-TB lineage2.2.1.1 in
ERR4798099 Other None
ERR4799378 Sensitive lineage4 None
ERR4799025 Pre-XDR-TB None
ERR6866022 Other None
ERR4799513 HR-TB lineage2.2 None
ERR4811493 HR-TB None
ERR6358979 Other None
ERR6866547 Sensitive lineage4 None
ERR6866410 Sensitive None
ERR6866639 Other None
ERR736872 Sensitive lineage4 None
ERR736834 Sensitive lineage4 None
ERR736848 HR-TB None
ERR736856 HR-TB lineage4 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR752229 Other lineage4.5 None
ERR751326 Sensitive lineage4 None
SRR1180996 HR-TB lineage4 None
ERR9786639 Sensitive lineage4.8 None
SRR10315567 Other lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180270 Other lineage2.2.1 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1158918 Sensitive lineage4 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1181091 Other lineage2.2.1.1 None
SRR1181251 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1181328 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR14801749 Sensitive None
SRR12142339 HR-TB lineage2.2.1 None
SRR14782405 HR-TB None
SRR1791747 Other La1.8.1 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR3675270 HR-TB None
SRR19295647 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR4815786 Sensitive lineage3 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675246 Sensitive lineage4 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
ERR158583 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SAMN02585910 Other lineage2.2.1 None
ERR2179727 Sensitive lineage4.5 cn
SRR3675550 Other None
ERR4815550 Other lineage4 None
SRR3675502 Other None
SRR5341384 Sensitive lineage4.9 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR2124081 MDR-TB lineage4.6.1.2 None
SRR5341366 Sensitive lineage4 None
SRR4033708 Sensitive lineage4.4.1.1.1 za
SRR7898221 MDR-TB lineage1.1.2 None
ERR2513121 Sensitive lineage3.1.3 None
ERR2446566 Other lineage4.1 None
ERR1035162 Other None
ERR2512770 Other lineage4.2.1 None
SRR5341453 Sensitive None
SRR5341425 Other lineage4 None
SRR5341387 Other lineage4 None
ERR4819368 Sensitive lineage4.8 gb
SRR5341298 Sensitive lineage4 None
SRR5341418 Other None
ERR4819660 Sensitive None
SRR5341456 Other None
SRR5341455 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341299 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341308 Sensitive lineage4 None
ERR1023509 Other None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
SRR5535933 HR-TB None
SRR5341461 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341469 Other lineage4 None
ERR2652959 Sensitive lineage4.4.1.1 None
SRR6045795 HR-TB lineage2.2.1 None
ERR2660539 Other lineage4.9 None
SRR6045892 Sensitive None
SRR6046299 HR-TB None
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6045045 Other lineage2.2.1 None
ERR4830540 RR-TB lineage2.2.1 None
SRR6046362 HR-TB None
SRR6046492 Other None
SRR6511621 HR-TB None
SRR6397441 Other lineage4 None
ERR4831117 HR-TB None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR6832249 Other lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6789624 MDR-TB lineage4.1 None
SRR6832787 RR-TB lineage2.2.1 None
ERR502510 Sensitive lineage4 None
SRR7535082 Sensitive lineage4 None
SRR9970980 Other lineage4.1.2 None
ERR502889 Other None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9970979 Sensitive lineage4.8 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR323066 Sensitive lineage4 None
SRR9971059 RR-TB lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
ERR323107 Other lineage4 None
DRR188519 Other lineage4.4.2 None
ERR323085 Sensitive lineage4 None
ERR067681 HR-TB None
ERR027293 Other None
ERR1034652 Other None
ERR067699 HR-TB lineage4 None
ERR1035296 HR-TB lineage4.9 br
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR1035297 MDR-TB lineage4.3.4.1 br
ERR1035299 MDR-TB lineage4.1.2.1 br
ERR1035300 HR-TB lineage4.1.2.1 br
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR1035318 Pre-XDR-TB lineage4.3.4.1 br
ERR1035356 Pre-XDR-TB lineage4.3.4.2 br
ERR1035122 Sensitive None
ERR1035293 MDR-TB lineage4.3.4.2 br
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR1035295 MDR-TB lineage4.1.2.1 br
ERR1035301 MDR-TB lineage4.3.2 br
ERR1035315 Pre-XDR-TB lineage4.3.4.1 br
ERR1035317 RR-TB lineage4.3.4.2 br
ERR1035316 MDR-TB lineage4.3.2 br
ERR1035354 MDR-TB lineage4.1.1 br
ERR1063883 Sensitive lineage4 None
ERR1063896 Sensitive None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
ERR1199132 Sensitive lineage4.6.1.1 None
ERR1213889 MDR-TB lineage4.3.4.2.1 rw
ERR1213874 MDR-TB lineage2.2.1 kr
ERR1213928 MDR-TB lineage4.3.3 pe
ERR1213875 Other lineage4.3.3 de
ERR1213912 HR-TB lineage4.1.2.1 gn
ERR1213931 MDR-TB lineage4.6.1.2;lineage4.3.3 pe
ERR1213930 Other lineage4.3.2 pe
ERR1213939 MDR-TB lineage4.3.3;lineage2.2.1 pe
ERR133986 HR-TB None
ERR1213937 Sensitive lineage4.1.2.1 pe
ERR1213940 RR-TB lineage4.3.3;lineage4.1.2.1 pe
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR323115 Sensitive lineage4 None
ERR3283057 HR-TB lineage4 None
ERR3439432 Other None
ERR3283055 HR-TB None
ERR3445504 HR-TB None