Rv3457c - c.540C>G


Drug resistance types
23 Sensitive 2 RR-TB 27 HR-TB 12 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 35 Other
lineage Counts
lineage Count
lineage4.9 45
lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 1
lineage6.1.1 2
lineage4.8 3
lineage2.2 2
lineage4.6.3;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2.1 5
lineage4.9;lineage9 2
lineage4.1.1.3 1
lineage4.6.2.2 2
M.canetti;lineage4.9 5
lineage2.2.1.2 2
1
lineage4.9;lineage6.3 1
lineage4.3.4.2.1 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage3 1
La1.7;M.canetti;lineage4.9 2
lineage3.1.2.2 1
La2;lineage4.9;lineage9 1
lineage4.4.2 1
lineage4 3
lineage4.9;lineage7 1
lineage2.2.1;lineage4.9 1
lineage4.4.1.1.1 1
La1.8.1 1
La2;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.7;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage6.1.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 101
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR926156 Sensitive lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045832 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR3283040 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR2514327 HR-TB lineage4.8 None
SRR5535933 Other lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR926162 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR736856 Sensitive lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR13423649 Sensitive lineage2.2.1 None
SRR3675461 RR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR926161 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
ERR926154 Sensitive lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR29096150 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1183111 HR-TB lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR987722 MDR-TB None
ERR926165 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR3283042 Other lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1175127 Other lineage2.2.1.2 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR926160 Sensitive lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3797015 HR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR6044942 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
DRR188519 Other lineage4.4.2 None
ERR323037 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR6046594 Sensitive lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR736831 Other lineage4.9 None
SRR29097037 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR28351339 MDR-TB lineage4 None
ERR3801503 Sensitive lineage4.6.2.2 None
SRR1180226 HR-TB lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4808964 RR-TB lineage2.2.1 None
SRR1172310 HR-TB lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR7240476 Other La1.8.1 None
ERR323039 HR-TB La2;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR473332 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR9787153 Other lineage6.1.3 None
ERR3799304 Other lineage6.1.1 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None