Rv0006 - c.1092T>C


Drug resistance types
11 Sensitive 9 RR-TB 37 HR-TB 22 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 58 Other
lineage Counts
lineage Count
lineage4.9 30
lineage4 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage2.2.1 21
La1.7;lineage4.9 6
La1.7;lineage4.2 1
1
La3;lineage4.9 7
M.canetti;lineage2.2 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.6.4;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2 2
lineage2.2.1.2 2
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.1.1.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.7;lineage3.1;lineage4 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.4.1.2 1
lineage4.9;lineage7 3
lineage2.2.1.1 3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.7;M.canetti;lineage4.9 4
lineage3 2
M.canetti;lineage4.2 1
La1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.1;lineage4.8 2
lineage1.2.1.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.1.3 1
La1.7;lineage4.9;lineage6 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.6.2.2 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.4.2 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.2;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.1;lineage4.9 1
lineage4.8.1 1
lineage4.3.2.1 1
spoligotype Counts
spoligotype Count
None 139
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4815441 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR176751 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR11068549 HR-TB lineage2.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR26331611 Sensitive lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR23862070 Sensitive lineage2.2.1 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819422 HR-TB lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR4818929 HR-TB lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR1183049 RR-TB lineage2.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675280 RR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR550807 MDR-TB lineage2.2.1 None
ERR176643 Other La3;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4827953 MDR-TB lineage2.2.1 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR11068254 Sensitive lineage3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR212033 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR28119827 Other La3;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR6046382 Sensitive lineage2.2.1 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR551292 HR-TB lineage2.2.1 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR13275995 HR-TB lineage2.2.1 None
ERR4798823 HR-TB lineage4 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR11252736 Other lineage4.9 None
ERR387051 Other lineage4.9 None
ERR550806 MDR-TB lineage2.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4820773 HR-TB lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR4827880 HR-TB lineage2.2.1 None
SRR3675446 RR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SAMEA2533484 MDR-TB lineage2.2.1 uz
ERR551293 HR-TB lineage2.2.1 None
ERR2446566 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR550806_ERR550807 MDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
DRR188519 Other lineage4.4.2 None
ERR3797064 Other La3;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1023509 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SAMEA2533840 HR-TB lineage2.2.1 kz
SRR5341456 Other lineage4.9 None
ERR11068505 HR-TB lineage2.2.1 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR16088147 Sensitive lineage2.2.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR4830141 MDR-TB lineage2.2.1 tj
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR5535933 Other lineage4.9 None
SRR18714776 Sensitive lineage2.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR11465604 HR-TB lineage4.8.1 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1165628 Other La3;lineage4.9 None
SRR5341325 HR-TB lineage3 in
SRR12708407 HR-TB lineage4.3.2.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR16156817 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR13276017 HR-TB lineage2.2.1 None