Rv0701 - c.84G>C


Drug resistance types
19 Sensitive 4 RR-TB 49 HR-TB 15 MDR-TB 4 Pre-XDR-TB 3 XDR-TB 133 Other
lineage Counts
lineage Count
lineage2.2.1 11
lineage4.9 65
lineage5.2 2
20
lineage3 3
lineage4.9;lineage6.3 7
lineage4.8;lineage4.9 2
lineage2.1;lineage4.9 14
M.canetti;lineage2.2 2
La1.7;M.canetti;lineage4.9 2
lineage4.1.1.1 2
lineage1;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 4
La3;lineage2.1;lineage6.3 1
La1.7;lineage4.9 6
La3;lineage2 1
M.canetti;lineage2.2.2;lineage6.2 2
La2;lineage2.2 1
lineage2.2.1;lineage4 1
lineage4.3.3 1
lineage4.1.2.1 7
lineage2.2 4
lineage2.1;lineage4.9;lineage6.3 10
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8 2
lineage4 2
lineage4.6.2.2 3
lineage4.1.3 2
La3;lineage4.8 2
La3;lineage2.2.1 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.2;lineage4 1
lineage2.1 3
La1.6;lineage4 1
lineage2.2.1.2;lineage7 1
lineage4.5 1
La3;M.canetti;lineage2.2.1 1
La3;lineage4.9 3
La3;lineage1.1.2 1
lineage4.1.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 2
lineage2.2.2 1
lineage2.2.1;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
La1.7.1;lineage4.9 1
lineage4.3.4.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.1.3 1
La1.7;lineage4.9;lineage6 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4 1
lineage6.3.1 1
lineage1.1.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.3 2
La2;lineage4.9 1
lineage2.2.1;lineage3 1
lineage4.3.2.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage4.9 1
La1;lineage4.1.2 1
lineage2.2.1.2 1
spoligotype Counts
spoligotype Count
None 227
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR2010299 MDR-TB lineage2.2.1 None
ERR4818110 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1184381 MDR-TB None
SRR28044873 Pre-XDR-TB lineage3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR9786604 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675457 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176651 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR9971114 Other lineage2.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
SRR18213713 HR-TB None
SRR20969677 HR-TB La3;lineage2 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR18003019 Other lineage2.2.1 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR13285068 Sensitive lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR3675235 Sensitive lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
ERR4815604 Other None
ERR2027263 Other lineage4 None
SRR16156817 Other lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6789626 Other None
ERR9786515 Other lineage4.1.2.1 None
ERR400326 Other lineage4.9 None
SRR3675236 Other None
ERR176779 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4800341 Other lineage3 None
ERR4816466 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR212125 HR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675311 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR9786843 Other None
SRR3675221 Other lineage4.9 None
ERR2514692 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR176778 HR-TB lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR28351554 Sensitive La1.6;lineage4 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR1196583 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4810624 MDR-TB lineage2.2 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1175074 Other None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046593 Other lineage4.9 None
ERR4816999 Other None
ERR4819051 Sensitive lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1063846 HR-TB lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR7535086 Other None
SRR12416842 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR1063849 HR-TB lineage4.9 None
ERR9117709 Other None
SRR3675549 Other lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR5311094 HR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR4797264 Sensitive lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR25827682 Other None
SRR6789621 Other lineage4.9 None
ERR234659 Other None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819781 Other lineage2.2.1 None
SRR3675572 Other None
ERR6866807 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811030 Sensitive lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
SRR5341453 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR3797086 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None