Rv0639 - c.186C>G


Drug resistance types
21 Sensitive 15 RR-TB 105 HR-TB 30 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 92 Other
lineage Counts
lineage Count
lineage4.9 129
lineage4.9;lineage9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7;lineage3.1;lineage4 1
lineage4.6.2.2 2
lineage2.2.1 11
La1;lineage4.9 3
La1.7;M.canetti;lineage4.9 5
La1.7;lineage4.9 10
lineage4.1.2.1 1
lineage4.9;lineage7 4
La2;lineage4.9;lineage9 1
lineage1.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.2.1.2 2
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage2.2.1.1 2
lineage4.8;lineage4.9 2
lineage3 3
La3;lineage4 1
lineage4.4.2 1
4
La1.7;lineage4.9;lineage6 1
lineage1.2.2.1;lineage4.4.1.1 2
M.canetti;lineage4.9 5
lineage4.1.1.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.1.2 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La2;lineage4.9 2
La1;lineage2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.2;La1.8.1 1
lineage3.1.2.2 1
La3;lineage4.9 7
lineage4 4
lineage4.6.3;lineage4.9 1
lineage4.3.2.1 2
lineage4.3.2;lineage4.9 1
lineage2.2 4
La1.7;lineage4.9;lineage7 3
lineage4.2.1 1
lineage4.3.4.2 1
La1.7 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.2;lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1;lineage4.1.2 1
lineage4.2;lineage4.9 3
lineage3.1;lineage9 1
lineage4.3.4 1
lineage4.1.1.3 1
lineage4.8 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;lineage4.9 2
lineage4.9;lineage6.1.3 1
lineage1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
La1.7.1;lineage4.9 1
lineage1.1.3.1 1
La1.6;lineage4 1
La1.2.BCG 1
lineage2.1;lineage4.9;lineage7 1
La2;lineage2.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 268
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR1063883 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR176778 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR2446566 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4769474 HR-TB lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR5311094 HR-TB lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR6045892 Sensitive lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR926155 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR11662690 HR-TB lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
DRR188519 Other lineage4.4.2 None
ERR4796577 HR-TB None
SRR28351347 Other lineage3 None
ERR6866807 RR-TB lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR6358979 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR3675441 RR-TB lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR4818252 HR-TB lineage4.1.1.2 None
SRR5341330 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR3675492 Other La1.7;lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR387051 RR-TB lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR1063855 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797063 Other La3;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR7496471 Sensitive lineage4 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6511621 HR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR751326 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR323107 HR-TB lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR9634265 Sensitive lineage4.3.4.2 None
ERR736831 Other lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR5341453 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4816656 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797184 HR-TB lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675222 Other La1.7 None
ERR4769452 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
ERR502510 HR-TB lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR6359082 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
ERR9786843 Other None
ERR987722 MDR-TB None
SRR28044873 Pre-XDR-TB lineage3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR137286 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR6866639 HR-TB lineage4.9 None
ERR926165 Other lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR926156 Other lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR11466044 Other lineage4.1.1.3 None
ERR926157 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR26399490 Sensitive lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR926160 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675585 HR-TB lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR3797046 HR-TB lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR3283040 HR-TB lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR736856 HR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
SRR28351554 Other La1.6;lineage4 None
ERR4797474 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR1175127 Other lineage2.2.1.2 None
SRR6046385 Sensitive lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046141 Other lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
ERR216965 Sensitive lineage4.9 None