Rv0667 - c.2232C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
119 Sensitive
2 RR-TB
44 HR-TB
4 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
66 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.9 | 131 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.7;lineage4.9 | 11 |
| lineage4.1.2.1 | 5 |
| lineage3.1.3 | 1 |
| lineage6.1.1 | 2 |
| lineage4.3.4.1 | 3 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| La1;lineage4.9 | 2 |
| lineage4 | 6 |
| lineage2.2.1 | 13 |
| La1.7.1;lineage4.9 | 1 |
| lineage3 | 2 |
| lineage2.2.1.2 | 3 |
| M.canetti;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| 1 | |
| lineage4.8 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.7 | 2 |
| lineage4.3.4 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage1;lineage4.9 | 2 |
| lineage4.1.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.2.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| La1.3 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage5.1.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3 | 1 |
| La1.7.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 238 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | SRR6046802 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2 | None | SRR3675387 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR12708416 | Sensitive | None | ERR4816151 | Sensitive | lineage4.8 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR176651 | Other | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR5535933 | Other | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4178226 | Sensitive | lineage4 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR363502 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR6044835 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4769514 | Other | La1.3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3275450 | Other | lineage4 | None | ERR369158 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR6358979 | Other | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.3 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4769552 | Sensitive | La1.3 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR11082573 | Sensitive | lineage3 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None |
|---|
