Rv0668 - c.3238_3240delATCinsCG


Drug resistance types
7 Sensitive 32 RR-TB 22 HR-TB 88 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 49 Other
lineage Counts
lineage Count
lineage4.9 34
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.7;lineage4.3.4.1 1
La3;M.canetti;lineage2.1;lineage4.9 12
lineage4.9;lineage7 1
La1.7 2
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage4.9 23
La1.7;M.canetti;lineage4.9 5
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage3 2
lineage4.5 2
lineage4.8 1
lineage2.1;lineage4.9 5
lineage1.1.2;lineage4 1
lineage2.2.2 1
M.canetti;lineage2.1;lineage4 1
lineage4.1.2.1 10
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.9 2
lineage4.1.1.3 2
La1.8.1 2
La1.7;lineage4.9 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage4.9 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.3.4.2.1 3
lineage1.2.1.2.1 1
lineage4.3.3 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage2.2.1 5
La1.7.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.4.2 1
lineage4 1
lineage4.6.3;lineage4.9 1
La1.2;La1.8.1 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.2.1.2 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 2
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage3 1
2
La1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
lineage4.4.1.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;M.canetti 1
M.canetti;lineage2.2 1
M.canetti 1
lineage4.9;lineage6.1.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.3.4.1 1
lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 199
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR3675222 Other La1.7 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR4769452 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341456 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR400529 Other lineage3 None
ERR752229 Other lineage4.5 None
ERR9786639 Sensitive lineage4.8 None
ERR4818710 Sensitive lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
SRR3675441 RR-TB lineage4.9 None
SRR069978 HR-TB lineage2.2.2 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR6046046 Other lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR2446118 RR-TB lineage4.1.2.1 nl
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4816964 HR-TB lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR11466044 Other lineage4.1.1.3 None
ERR2693228 RR-TB lineage4.9 None
SRR1791696 RR-TB La1.8.1 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR13861381 HR-TB lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4816551 MDR-TB lineage4.1.1.3 None
SRR1166821 RR-TB lineage4.1.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR2446566 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR176751 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4830353 HR-TB La1.7 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR6044815 RR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR3468607 RR-TB lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR5908228 RR-TB lineage4.3.3 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR7240492 MDR-TB La1.7.1 None
SRR13861326 Other lineage4.9 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
DRR188519 Other lineage4.4.2 None
SRR6045053 Other lineage4 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR11465597 Sensitive lineage4.1.2.1 None
SRR3675270 Other lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR13423544 Other lineage4.5 None
ERR8665994 RR-TB lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR3275215 RR-TB lineage4.1.2.1 nl
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1165423 RR-TB lineage4.1.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR1165584 Other lineage4.1.2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
SRR1640750 RR-TB None
ERR212001 HR-TB None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1175127 Other lineage2.2.1.2 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR6046878 Other lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675482 RR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
ERR266126 Other La2;M.canetti None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4818536 Other lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
ERR266120 Other M.canetti None
SRR6045347 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR11465801 Other lineage4.3.4.1 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR2229143 RR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None