Rv0006 - p.Asp367Ala
Drug resistance types
18 Sensitive
5 RR-TB
46 HR-TB
9 MDR-TB
5 Pre-XDR-TB
2 XDR-TB
95 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 11 |
| La3;lineage4.9 | 7 |
| lineage4.9 | 59 |
| lineage3.1.2.1 | 1 |
| lineage2.2 | 4 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 4 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4 | 3 |
| lineage4.1;lineage4.8 | 2 |
| 7 | |
| lineage4.6.2.2 | 2 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.9;lineage6.3 | 6 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
| La3 | 2 |
| La1;lineage4.1.2 | 1 |
| lineage2.1 | 2 |
| lineage3 | 4 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage2.2.2;lineage4 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| lineage4.3.4.2.1 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La3;lineage1.1.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| La1;lineage4.9 | 4 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9 | 3 |
| La3;lineage2.2.1 | 1 |
| lineage4.8 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage3.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| La1.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 180 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18003019 | Other | lineage2.2.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | SRR29096943 | Sensitive | lineage3.1.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR13285068 | Sensitive | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2027263 | Other | lineage4 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR16156817 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR6789626 | Other | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1172817 | Other | La3 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR4407452 | Other | lineage3 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR1196566 | Other | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046046 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR14782054 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6046593 | Other | lineage4.9 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR990545 | Other | lineage3 | None | SRR1165699 | Other | lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR4816656 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR212001 | HR-TB | None | SRR6789621 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4407463 | HR-TB | None | ERR4819241 | Other | lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR11252736 | Other | lineage4.9 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4769450 | Other | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | SRR28119777 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR26331611 | Sensitive | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | ERR6359082 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR9786843 | Other | None | SRR1184381 | MDR-TB | None | SRR28119805 | Other | lineage4.9 | None | ERR4817060 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR3675270 | Other | lineage4.9 | None | SRR3675507 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
|---|
