EBG00000313325 - n.196C>T


Drug resistance types
132 Sensitive 2 RR-TB 44 HR-TB 16 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 82 Other
lineage Counts
lineage Count
lineage2.2.1 22
lineage4.1.2.1 14
46
lineage4 89
lineage4.9 55
lineage1.1.3.1 1
lineage4.5 2
lineage6.1.3 1
lineage4.3.4.2 1
lineage6 2
lineage2.2.1.2 3
lineage4.4.1.1.1 1
lineage2.2.1.1 3
lineage4.2.1 3
La1.8.1 2
lineage7;lineage2.2.1.2 1
lineage2.2 4
lineage1.1.1 1
lineage4.1 3
lineage2.1 1
lineage4.1.1 1
lineage3 3
lineage3.1.3 1
lineage5.1.4 1
lineage4.6.2.2 1
lineage4.8 3
lineage4.9;lineage2.1 1
lineage4.3.2.1 2
lineage1.1.2 1
lineage4.1.2 2
lineage4.7 1
lineage4.3.3 1
lineage2.2.2 1
lineage4.4.2 1
La1.3 5
La1.2 2
lineage4.9;La1.3 1
spoligotype Counts
spoligotype Count
None 283
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5866199 MDR-TB lineage2.2.1 None
ERR6865513 Other lineage4.1.2.1 None
ERR6358979 Other None
ERR6358991 HR-TB None
ERR6865502 Sensitive lineage4 None
ERR6358951 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR6866547 Sensitive lineage4 None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR6866639 Other None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR752229 Other lineage4.5 None
ERR736834 Sensitive lineage4 None
ERR9787256 Other lineage6.1.3 None
ERR9634265 Sensitive None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9787336 Other lineage6 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR9787362 Sensitive lineage6 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1158918 Sensitive lineage4 None
SRR1175496 HR-TB lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1172885 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1180996 HR-TB lineage4 None
SRR1175500 MDR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR14782405 HR-TB None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR14801749 Sensitive None
SRR1791725 Other La1.8.1 None
SRR1791747 Other La1.8.1 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR21658550 Other lineage1.1.1 None
SRR20970016 Other lineage2.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675477 Other lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
SRR3675472 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4 None
SRR3675473 Sensitive lineage4.9 None
ERR702405 Sensitive lineage2.1 None
SRR3675209 Sensitive lineage4.9 None
ERR4815471 Other lineage4.9 None
SRR3675229 Other lineage4 None
ERR3275450 Other lineage4 None
SRR3675246 Sensitive lineage4 None
SRR3675249 Sensitive lineage4.9 None
SRR3675279 Other None
SRR3675247 Other lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
SRR3675270 HR-TB None
SRR3675542 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
ERR4816964 Other lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675283 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4 None
SRR3675387 Sensitive None
SRR3675522 Other None
SRR3675537 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675541 Sensitive lineage4.9 None
ERR212121 HR-TB None
SRR3675548 Sensitive lineage4.9 None
ERR212123 Other None
SRR3675577 Sensitive lineage4.9 None
SRR5341384 Sensitive lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4817998 Other lineage3 None
ERR4819051 Other lineage4 None
ERR2513121 Sensitive lineage3.1.3 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR2446566 Other lineage4.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818110 Sensitive lineage4.9 None
ERR2512770 Other lineage4.2.1 None
ERR3275709 HR-TB lineage3 nl
ERR2513283 Other lineage5.1.4 None
SRR5341453 Sensitive None
SRR5341387 Other lineage4 None
SRR5341366 Sensitive lineage4 None
SRR5341296 Sensitive lineage4.9 None
SRR5341396 Other lineage4 None
ERR4819357 Other lineage4.9 None
SRR5341425 Other lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341437 Sensitive lineage4.9 None
SRR5341456 Other None
SRR5341455 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341299 Sensitive lineage4 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341345 Sensitive lineage4.9 None
ERR2446382 Other lineage4 None
ERR6359082 Other lineage4.9 None
SRR5341308 Sensitive lineage4 None
ERR4819933 Other lineage4.9 None
SRR5341323 Sensitive lineage4 None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2515230 Sensitive lineage4.8 None
ERR2517475 Other lineage4 None
SRR5341461 Sensitive lineage4 None
SRR5341469 Other lineage4 None
ERR245774 HR-TB lineage4.1.2.1 mw
ERR2693238 HR-TB lineage4.9 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2693227 Other lineage4.9 None
SRR5535933 HR-TB None
ERR2660539 Other lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6045503 HR-TB None
SRR6046141 Other lineage4.9 None
SRR6046210 Other lineage4 None
SRR6045706 Sensitive lineage4 None
SRR6045892 Sensitive None
SRR6045832 HR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6045053 Other None
SRR6044876 Sensitive lineage4 None
SRR6045010 Other lineage4 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6045217 Other lineage4 None
SRR6045191 Sensitive lineage4.9 None
SRR6046046 Other None
SRR6046245 Other lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046253 HR-TB lineage4.9 None
SRR6046299 HR-TB None
SRR6046259 Sensitive lineage4.9 None
ERR4798199 Sensitive lineage4.1.2.1 in
SRR6046385 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6046492 Other None
SRR6046897 Sensitive lineage4 None
SRR6046611 HR-TB lineage4.9 None
SRR6046802 Other lineage4 None
SRR6046863 Sensitive lineage1.1.2 None
SRR6046878 HR-TB lineage4 None
SRR6511621 HR-TB None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831117 HR-TB None
SRR6789624 MDR-TB lineage4.1 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831638 Sensitive None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR9970980 Other lineage4.1.2 None
SRR8217918 HR-TB None
SRR6797274 Sensitive lineage4.1.2.1 None
SRR6855695 Sensitive lineage4.8 None
SRR6982059 Sensitive lineage4.1.2.1 None
ERR502510 Sensitive lineage4 None
SRR7131091 Sensitive lineage4.1.2 None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
SRR7535082 Sensitive lineage4 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9970979 Sensitive lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
DRR184629 Other lineage2.2.1 None
ERR323066 Sensitive lineage4 None
DRR184932 Other lineage2.2.1 None
DRR185024 Other lineage2.2.2 None
ERR067699 HR-TB lineage4 None
DRR188519 Other lineage4.4.2 None
ERR323085 Sensitive lineage4 None
ERR1063883 Sensitive lineage4 None
ERR1035122 Sensitive None
ERR1063896 Sensitive None
ERR133825 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR137286 Sensitive lineage4 None
ERR323115 Sensitive lineage4 None
ERR3445504 HR-TB None
ERR3283055 HR-TB None
ERR349266 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373946 Sensitive lineage4 None
ERR3797046 HR-TB None
ERR3797081 Sensitive lineage4 None
ERR400320 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400345 Other lineage4 None
ERR400326 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR4178226 Sensitive lineage4 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR4024991 Other None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR473334 HR-TB lineage4.9 None
ERR4769408 Other La1.3 None
ERR4769452 HR-TB None
ERR4769427 Other La1.2 None
ERR4769442 HR-TB lineage4 None
ERR4769552 Other La1.3 None
ERR4769497 HR-TB La1.2 None
ERR4769457 Other lineage4.9 None
ERR4769450 HR-TB None
ERR4769516 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4796254 Sensitive lineage4 None
ERR4769555 Other La1.3 None
ERR4797313 HR-TB None
ERR4797264 Sensitive None
ERR4797184 Sensitive lineage4 None
ERR4797474 Other None
ERR4797350 Sensitive lineage4.9 None
ERR4798099 Other None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4799025 Pre-XDR-TB None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4798431 HR-TB None
ERR4799378 Sensitive lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None
ERR4811030 Sensitive None
ERR4811493 HR-TB None
ERR4812155 Sensitive None
ERR4810624 HR-TB lineage2.2 None