EBG00000313325 - n.196C>T


Drug resistance types
70 Sensitive 3 RR-TB 36 HR-TB 10 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 68 Other
lineage Counts
lineage Count
La1.2 1
lineage4.9 100
lineage2.2.1 16
lineage3 1
La1.3 1
lineage1.1.1 1
lineage4.4.1.1 1
lineage4 3
M.canetti;lineage1 1
lineage4.1.1.3 1
lineage4.1.2.1 8
lineage4.9;lineage6.3 1
La1;lineage4.9 2
lineage1.1.3.1 1
lineage2.2.2 1
lineage2.2.1.2 3
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.8;lineage4.9 2
lineage4.7 1
lineage4.9;lineage6.1.3 1
lineage2.2.1.2;lineage7 1
lineage4.5 2
lineage4.1;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
M.canetti;lineage4.9;lineage9 1
lineage4.8 2
lineage4.1.2 1
lineage4.9;lineage9 1
lineage6 1
lineage2.2.1.1 3
lineage3.1.3 1
lineage2.2 4
lineage4.1.1.3;lineage4.9 2
lineage4.4.1.1.1 1
lineage4.2.1 2
lineage4.3.3 1
lineage4.3.4.2 1
La3;M.canetti;lineage4.9 1
La1.8.1 5
lineage6.1.3 2
La1.2;La1.8.1 1
La1;lineage2;lineage4.9 1
lineage4.3.2.1 1
lineage4.4.2 1
lineage4.9;lineage7 1
2
La1.7;lineage4.9;lineage6 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.3.1;lineage4.9;lineage6 1
spoligotype Counts
spoligotype Count
None 191
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769427 Other La1.2 None
ERR6866410 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
ERR3275709 HR-TB lineage3 nl
ERR4769408 Other La1.3 None
SRR21658550 Other lineage1.1.1 None
ERR323115 Sensitive lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR1063883 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7496471 Sensitive lineage4 None
SRR15014655 Other M.canetti;lineage1 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR400336 Sensitive lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675260 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
DRR185024 Other lineage2.2.2 None
SRR1180172 Other lineage2.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR4769452 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
ERR4798199 Sensitive lineage4.1.2.1 in
SRR1173777 Sensitive lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR6045503 Sensitive lineage4.9 None
ERR4815471 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR752229 Other lineage4.5 None
ERR323066 Sensitive lineage4.9 None
SRR1173568 Sensitive lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR12142339 HR-TB lineage2.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR2515230 Sensitive lineage4.8 None
SRR5535933 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
ERR6358979 Other lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR3675514 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR502510 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR161037 Other lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6511621 Sensitive lineage4.9 None
DRR184629 Other lineage2.2.1 None
ERR6358951 Sensitive lineage4.9 None
ERR9787362 Sensitive lineage6 None
ERR4812155 Other lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR373947 Other lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR6359082 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR2513121 Sensitive lineage3.1.3 None
ERR473334 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR3283055 HR-TB lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR6046878 Other lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR2512770 Sensitive lineage4.2.1 None
SRR6045010 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1158918 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
SRR6982059 Sensitive lineage4.1.2.1 None
ERR736872 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR6797274 Sensitive lineage4.1.2.1 None
ERR4810624 MDR-TB lineage2.2 None
SRR1175127 Other lineage2.2.1.2 None
ERR4819357 Sensitive lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR502511 Sensitive lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR6045191 Sensitive lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR7617847 Other La1.8.1 None
SRR6046046 Other lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
ERR9787256 Other lineage6.1.3 None
SRR5341384 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6044876 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR6045371 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR751326 Other lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR245774 HR-TB lineage4.1.2.1 mw
SRR14802079 MDR-TB lineage4.2.1 None
SRR3675541 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045706 Sensitive lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR12708416 Sensitive None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR5341299 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1791725 Other La1.8.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4811030 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR1063896 Sensitive None
ERR9787336 RR-TB lineage6.1.3 None
ERR400320 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR7240476 Other La1.8.1 None