SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR037510
|
Other
|
lineage1.1.3.2
|
mw
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR4816113
|
Sensitive
|
lineage4.1.1.1
|
None
|
SRR1165506
|
Other
|
lineage4.1.2.1
|
None
|
ERR1082121
|
Sensitive
|
lineage4.9;lineage5.1.1
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
SRR3675507
|
Other
|
lineage4.9
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR11252736
|
Other
|
lineage4.9
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR4816549
|
Other
|
lineage2.2.1
|
None
|
ERR1082134
|
Sensitive
|
lineage5.1.1
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR11342658
|
RR-TB
|
lineage4.1.2
|
None
|
SRR11342668
|
Pre-XDR-TB
|
lineage4.8.1
|
None
|
ERR867568
|
Other
|
lineage2.2.1;lineage4
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4819948
|
Other
|
lineage4.4.1.1
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3283028
|
Other
|
La3;lineage4
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
ERR4819017
|
Other
|
lineage3
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SAMN02585942
|
Sensitive
|
lineage4.1.2
|
None
|
ERR5311083
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4817735
|
Other
|
lineage4.8
|
None
|
SRR1062919
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1181085
|
Sensitive
|
lineage4.1.2
|
None
|
SRR1140753
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
ERR9119508
|
MDR-TB
|
lineage4.6.4
|
None
|
ERR245758
|
Other
|
lineage4.9.1
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
SRR11342669
|
Other
|
lineage4.8
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
SRR6982239
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
ERR12015086
|
RR-TB
|
lineage4.8
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
SRR3675552
|
Other
|
lineage4.9
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
ERR867526
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR867538
|
Other
|
lineage4.2.2.2
|
None
|
SRR1163221
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
ERR13292526
|
Other
|
lineage4.9
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1167055
|
Other
|
lineage4.1.2.1
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR11466242
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
ERR987719
|
HR-TB
|
lineage3
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
SRR11342682
|
Other
|
lineage4.1.2
|
None
|
ERR867574
|
Other
|
lineage4.9
|
None
|
ERR216965
|
Sensitive
|
lineage4.9
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR867567
|
RR-TB
|
lineage3
|
None
|
SRR15368973
|
Other
|
lineage4.9
|
None
|
SRR7236233
|
Other
|
La1.8.1
|
None
|
ERR4816964
|
Sensitive
|
lineage4.9
|
None
|
ERR9787033
|
Sensitive
|
lineage6.1.2
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR2229198
|
Sensitive
|
lineage4.8
|
None
|
SRR1173384
|
Other
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
ERR363437
|
Sensitive
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR5341430
|
Other
|
lineage3
|
None
|
ERR4769433
|
RR-TB
|
lineage4.9
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675461
|
RR-TB
|
lineage4.9
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5067471
|
Sensitive
|
lineage2.2.1
|
None
|
ERR867554
|
Other
|
lineage4.3.4.1
|
None
|
ERR502479
|
RR-TB
|
lineage4.9
|
None
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
ERR11465665
|
Other
|
lineage4.1.1.3
|
None
|
SRR3675548
|
Sensitive
|
lineage4.9
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR13888750
|
Other
|
La2
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
ERR4769457
|
Other
|
lineage4.9
|
None
|
ERR4819876
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
SRR1184308
|
Sensitive
|
lineage4.9
|
None
|
ERR9786515
|
Other
|
lineage4.1.2.1
|
None
|
ERR13245558
|
MDR-TB
|
La3;lineage2.2.2
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
ERR760877
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
ERR4188213
|
Other
|
La1.8.1
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR867572
|
Other
|
lineage4.9
|
None
|
SRR3675318
|
Other
|
lineage4.9
|
None
|
SRR1791696
|
Other
|
La1.8.1
|
None
|
SRR3675481
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6785263
|
Sensitive
|
lineage2.2.1
|
None
|
ERR161170
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR2179737
|
HR-TB
|
lineage4.2.1
|
None
|
SRR3675561
|
Other
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR3675260
|
Sensitive
|
lineage4.9
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
SRR7535086
|
Other
|
|
None
|
SRR23961542
|
Other
|
La1;lineage4.9
|
None
|
SRR5341267
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR069981
|
HR-TB
|
lineage2.2.2
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR5007193
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
SRR11342698
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
ERR11465025
|
Other
|
lineage4.1.1.3
|
None
|
SRR18002881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR4818988
|
Other
|
lineage1.2.2
|
None
|
ERR760733
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
SRR1173767
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SRR7535047
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR216928
|
Other
|
lineage4.9.1
|
None
|
SAMN02380982
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR28868489
|
Other
|
lineage2.2.1
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
ERR4816100
|
Sensitive
|
lineage1.1.2;lineage4.1.2.1;lineage4.1.3
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
ERR176766
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
SRR1180446
|
Other
|
lineage4.9
|
None
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR11466499
|
Other
|
lineage4.3.4.1
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
ERR2027209
|
MDR-TB
|
lineage1.2.1.1
|
None
|
ERR867527
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
ERR978765
|
RR-TB
|
lineage4.8
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
SRR11871419
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR10315556
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4816610
|
Other
|
lineage4.3.3
|
None
|
ERR4818624
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
SRR1173788
|
Sensitive
|
lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
SRR1180237
|
Sensitive
|
lineage4.1.2
|
None
|
ERR867524
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR369151
|
Other
|
lineage4.9
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
ERR4872102
|
MDR-TB
|
lineage4.6.4
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675506
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR550636
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
SRR25827687
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1735596
|
RR-TB
|
lineage4.9
|
None
|
ERR772255
|
MDR-TB
|
lineage2.1;lineage4.3.2
|
None
|
ERR8665994
|
Other
|
lineage4.9
|
None
|
SRR1172844
|
Sensitive
|
lineage4.9
|
None
|
ERR10796628
|
Other
|
lineage4.3.3
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR28119741
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3797083
|
RR-TB
|
lineage4.9
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
ERR181940
|
Sensitive
|
lineage3.1.1
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
ERR4814745
|
Other
|
lineage4.6.5
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6046117
|
Other
|
lineage4.9
|
None
|
SRR1196677
|
Other
|
lineage2.2
|
None
|
SRR3675210
|
Sensitive
|
lineage4.9
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4769427
|
Other
|
La1.2
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1166821
|
Other
|
lineage4.1.2.1
|
None
|
ERR867575
|
Other
|
lineage4.9
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
SRR1173218
|
Other
|
lineage4.3.3
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR1181020
|
Other
|
lineage2.2.1
|
None
|
ERR4819579
|
HR-TB
|
lineage4.3.3
|
None
|
SRR1196494
|
MDR-TB
|
|
None
|
SRR1049672
|
Other
|
lineage3
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
ERR2446509
|
Other
|
lineage3
|
nl
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
SRR1169249
|
Other
|
lineage4.9
|
None
|
ERR4596904
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
ERR11081257
|
Other
|
lineage4.8
|
None
|
SRR11342686
|
MDR-TB
|
lineage4.8
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
SRR1173515
|
Sensitive
|
lineage4.9
|
None
|
ERR6865502
|
Sensitive
|
lineage4
|
None
|
ERR10796563
|
Other
|
lineage4.3.3
|
None
|
ERR4818126
|
Other
|
lineage1.2.2
|
None
|
ERR9786558
|
Other
|
lineage4.3.4.2
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
ERR4817692
|
HR-TB
|
lineage1.1.2;lineage4
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
ERR11489020
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4816852
|
Other
|
lineage4.9
|
None
|
ERR4816548
|
HR-TB
|
lineage4.5
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
ERR4178226
|
Sensitive
|
lineage4
|
None
|
SAMEA2533358
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
ERR4819933
|
Sensitive
|
lineage4.9
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR867540
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18002945
|
Other
|
lineage2.2.1
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR11342653
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796351
|
Sensitive
|
lineage4.9
|
None
|
SRR1049581
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR26159053
|
Sensitive
|
lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR18003046
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29093909
|
Other
|
lineage4.9
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
SRR6046802
|
Other
|
lineage4.9
|
None
|
SRR10993957
|
Other
|
La1.6
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR171142
|
Other
|
lineage3.1.1;lineage4.9
|
None
|
SRR1196545
|
Sensitive
|
lineage4.9
|
None
|
ERR990545
|
Other
|
lineage3
|
None
|
ERR349298
|
Sensitive
|
lineage4.9
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
SRR18003049
|
Other
|
lineage2.2.1
|
None
|
SRR7240350
|
Other
|
La1.8.1
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR473283
|
Sensitive
|
lineage2.2.1
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR108424
|
Sensitive
|
lineage4.8
|
None
|
ERR9117709
|
Other
|
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
SRR1181242
|
Sensitive
|
lineage4.1.2
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR4821679
|
Other
|
lineage4.3.3
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR1173562
|
Sensitive
|
lineage4.9
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1;lineage4.9
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6785267
|
Other
|
lineage2.2.1
|
None
|
SRR10993951
|
RR-TB
|
La1.6
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR4822261
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4819357
|
Sensitive
|
lineage4.9
|
None
|
SRR069978
|
HR-TB
|
lineage2.2.2
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1175496
|
Sensitive
|
lineage4.9
|
None
|
SRR29772570
|
Other
|
lineage4.9
|
None
|
ERR4831841
|
HR-TB
|
lineage2.2.1;lineage4.4.2
|
None
|
SRR1180440
|
Other
|
lineage4.9
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1175074
|
Other
|
|
None
|
ERR9787336
|
RR-TB
|
lineage6.1.3
|
None
|
SRR19303820
|
RR-TB
|
lineage4.8
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
ERR3797067
|
Other
|
La1.8.1
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
ERR1023250
|
Sensitive
|
lineage6.1.1
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1183049
|
RR-TB
|
lineage2.2
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
SRR3675482
|
Other
|
lineage4.9
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR10796564
|
Other
|
lineage4.3.3
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
SRR1169194
|
Other
|
lineage4.9
|
None
|
SRR7069800
|
Other
|
lineage3.1.2.1
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
SRR7240476
|
Other
|
La1.8.1
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
SRR9613550
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR10796633
|
Other
|
lineage4.3.4.2
|
None
|
SRR7069835
|
Other
|
lineage2.2.1
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR1173385
|
Sensitive
|
lineage4.9
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
SRR5341332
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
SRR1162740
|
Other
|
lineage4.1.2.1
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR867569
|
Other
|
lineage4.9
|
None
|
ERR1023302
|
MDR-TB
|
La3;lineage3
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
ERR4816585
|
Other
|
lineage2.2
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675279
|
Sensitive
|
lineage4.9
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR10796620
|
Other
|
lineage4.1.1.1
|
None
|
SRR5007169
|
RR-TB
|
lineage4.8.2
|
None
|
ERR108125
|
RR-TB
|
lineage4.9
|
None
|
SRR3675514
|
Sensitive
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
ERR4816551
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR29093099
|
MDR-TB
|
La3;lineage2.2.2
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
ERR3283031
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
SRR1062880
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
ERR3468544
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6046897
|
Sensitive
|
lineage4.9
|
None
|
SRR8692887
|
Other
|
|
None
|
ERR4821704
|
Other
|
lineage4.3.3
|
None
|
ERR12015085
|
Other
|
lineage4.8
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4821796
|
Other
|
lineage4.1.1.1
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
SRR1175508
|
Sensitive
|
lineage4.9
|
None
|
ERR3283016
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4819096
|
Other
|
lineage4.4.1.1
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
SRR28119753
|
Other
|
lineage4.9
|
None
|
SRR3675209
|
Sensitive
|
lineage4.9
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR1196474
|
Other
|
lineage3.1.1
|
None
|
ERR2027290
|
Other
|
lineage3.1.2.1;lineage4.9
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR5311082
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR133816
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR18003012
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
ERR4816904
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
ERR978767
|
RR-TB
|
lineage4.8
|
None
|
SRR6045948
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4814976
|
Other
|
lineage4.9
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
SRR25827605
|
Pre-XDR-TB
|
lineage2.2.1;lineage3;lineage4
|
None
|
ERR4819622
|
Other
|
lineage4.1.2.1
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR978766
|
RR-TB
|
lineage4.8
|
None
|
DRR184913
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2446154
|
Sensitive
|
lineage4.4.1.1
|
nl
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR163970
|
Sensitive
|
lineage4.6.1.2
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
SRR5007168
|
Other
|
lineage4.8.2;lineage4.9
|
None
|
ERR867522
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7236330
|
Other
|
La1.8.1
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
ERR4814709
|
Other
|
lineage4.1.1.1
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR6831950
|
Sensitive
|
lineage4.3.3
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
SRR6046259
|
Sensitive
|
lineage4.9
|
None
|
ERR3283017
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
SRR1062928
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR502470
|
RR-TB
|
lineage4.9
|
None
|
ERR502517
|
Other
|
lineage5.1.1
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797060
|
Other
|
La1.8.1
|
None
|
SRR16278274
|
Other
|
La1.4
|
None
|
SRR1011488
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1510066
|
RR-TB
|
lineage1.2.1.2.1
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
ERR867571
|
Other
|
lineage4.9
|
None
|
SRR28868424
|
Sensitive
|
lineage3.1.2.1
|
None
|
ERR13292525
|
Other
|
lineage4.9
|
None
|
SRR29603691
|
Sensitive
|
lineage3
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
SRR1062871
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
ERR9119096
|
RR-TB
|
lineage4.3.3
|
None
|
ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
ERR9786843
|
Other
|
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR1062859
|
Sensitive
|
lineage2.2.1
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR28044634
|
Other
|
lineage3
|
None
|
ERR2514692
|
Other
|
|
None
|
SRR1172857
|
Other
|
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR4817060
|
Other
|
|
None
|
SRR8692893
|
Other
|
lineage4.9
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
SRR1173153
|
Other
|
lineage4.9
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR9786671
|
Other
|
|
None
|
SAMN02350446
|
Sensitive
|
lineage2.2.1
|
None
|
SRR13861396
|
HR-TB
|
lineage4.9
|
None
|
SRR5341365
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1140724
|
Other
|
lineage2.2.1
|
None
|
SRR1173453
|
Other
|
lineage4.4.1.1
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
SRR3675558
|
HR-TB
|
M.canetti;lineage4.1.1.3;lineage6.3;lineage8
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1640750
|
Other
|
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
ERR970445
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR25827452
|
MDR-TB
|
lineage1.1.2;lineage2.2.1;lineage4.2.2.2
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
SRR1140736
|
Other
|
lineage4.1.2.1
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
SRR23961558
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR18289200
|
Other
|
lineage4.9
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
ERR4769512
|
Sensitive
|
lineage4.9
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4816322
|
Other
|
lineage4.9
|
None
|
SRR1140716
|
Other
|
lineage3
|
None
|
SRR1173170
|
Other
|
lineage4.9
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR176580
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR16149129
|
MDR-TB
|
lineage4.2.2.1
|
None
|
ERR12015084
|
Other
|
lineage4.8
|
None
|
ERR4820151
|
Other
|
lineage4.8
|
None
|
SRR7240147
|
Other
|
La1.8.1
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR2693229
|
RR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR1196571
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
ERR2660539
|
Other
|
lineage4.9
|
None
|
ERR3275615
|
Sensitive
|
lineage4.4.1.1
|
nl
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR10796578
|
Other
|
lineage2.2.1
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
ERR752012
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR11342676
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
ERR400538
|
RR-TB
|
lineage5.1.2
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR4819864
|
RR-TB
|
lineage1.1.3.1
|
None
|
ERR970413
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
SRR3675472
|
Sensitive
|
lineage4.9
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR5908228
|
RR-TB
|
lineage4.3.3
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR5341396
|
Other
|
lineage3;lineage4.9
|
None
|
SRR28868381
|
Other
|
lineage4.9
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR18002998
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR867525
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR867545
|
Other
|
lineage4.9
|
None
|
ERR867573
|
Other
|
lineage4.9
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR502480
|
Other
|
lineage5.1.1
|
None
|
ERR2851356
|
Sensitive
|
lineage4.9
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
SRR11342655
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR1173118
|
Other
|
lineage2.2.1
|
None
|
SRR1182994
|
Sensitive
|
lineage4.1.2
|
None
|
ERR212001
|
HR-TB
|
|
None
|
ERR212033
|
Other
|
lineage4.9
|
None
|
SRR1173770
|
Other
|
lineage4.9
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
SRR11342646
|
HR-TB
|
lineage3
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR3797079
|
Sensitive
|
lineage4.9
|
None
|
ERR4818851
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
SRR1173281
|
Other
|
lineage3
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
SRR18003024
|
RR-TB
|
lineage2.2.1
|
None
|
ERR11465906
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR3797087
|
Sensitive
|
lineage4.9
|
None
|
SRR11342671
|
RR-TB
|
lineage4.1.3
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR6044925
|
Sensitive
|
lineage4.9
|
None
|
SRR7240492
|
HR-TB
|
La1.7.1
|
None
|
SRR16156804
|
Sensitive
|
lineage4.9
|
None
|
SRR11342693
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR11462861
|
Other
|
La1.8.1
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
SRR1173310
|
Other
|
lineage3.1.1
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6046385
|
Sensitive
|
lineage4.9
|
None
|
SRR3675444
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR867544
|
Other
|
lineage4.9
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR1196566
|
Other
|
lineage4.9
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
ERR3275190
|
Other
|
lineage3
|
nl
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
SRR1049674
|
HR-TB
|
lineage2.2.1
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
ERR4188342
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SRR1165423
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
SAMN02414850
|
Other
|
lineage4.1.2.1
|
None
|
ERR4800102
|
Sensitive
|
lineage3.1.2.1
|
None
|
DRR188816
|
Sensitive
|
lineage4.2.2
|
None
|
SRR1915485
|
Other
|
La1.2.BCG
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
SRR29016780
|
Other
|
lineage4.9
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR23961549
|
Other
|
La1.2
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
SRR1238558
|
Other
|
lineage4.9
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
ERR10796598
|
Other
|
lineage4.9
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
SRR1792265
|
Other
|
La1.8.1
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR4814536
|
MDR-TB
|
M.canetti;lineage2.1;lineage3
|
None
|
ERR4816464
|
Other
|
lineage3
|
None
|
SRR11342664
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR1165584
|
Other
|
lineage4.1.2.1
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR11252664
|
Other
|
lineage2.2.1
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR234659
|
Other
|
|
None
|
ERR736822
|
Sensitive
|
lineage4.4.1.2
|
None
|
SRR1049559
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4769418
|
Other
|
La1.2
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1162864
|
Other
|
lineage4.1.2.1
|
None
|
SRR6044815
|
Other
|
lineage4.9
|
None
|
SRR21690574
|
Other
|
lineage4.1.2.1
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
SRR5431730
|
Other
|
La1.8.1
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR1181289
|
Other
|
lineage2.2.1
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR12006550
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR6785227
|
Other
|
lineage2.2.1
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR18911231
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
ERR4815471
|
Sensitive
|
lineage4.9
|
None
|
ERR4816745
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR18003030
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21732980
|
Other
|
lineage4.3.3
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
ERR4821214
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR1140712
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
SRR3743401
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13861510
|
Other
|
lineage4.9
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR6982099
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR1049560
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
ERR2513724
|
Sensitive
|
lineage4.3.2.1
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
ERR3468607
|
Other
|
lineage4.9
|
None
|
SRR1049675
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|