EBG00000313339 - n.651G>T
Drug resistance types
69 Sensitive
44 RR-TB
95 HR-TB
109 MDR-TB
16 Pre-XDR-TB
4 XDR-TB
214 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 158 |
| lineage2.2.1 | 32 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 11 |
| lineage2.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 35 |
| lineage2.2.1.2 | 2 |
| lineage4.1.1.3 | 5 |
| lineage2.2;lineage4 | 1 |
| lineage4.9;lineage6.3 | 7 |
| lineage2.2;lineage4.9 | 1 |
| M.canetti;lineage2.2 | 3 |
| lineage2.1;lineage4.9 | 13 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage6.1.3 | 2 |
| M.canetti;lineage4.9 | 3 |
| lineage4.8.1 | 2 |
| lineage4.1.2.1 | 15 |
| lineage4 | 3 |
| lineage3.1.2.1 | 2 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.3.4.2.1 | 7 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.3.4.1 | 3 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| La3;M.canetti | 8 |
| lineage1.1.3.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.7;lineage4.9 | 9 |
| lineage4.3.3 | 8 |
| La3 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1.2 | 1 |
| La1.8.1 | 5 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage4.3.2 | 1 |
| La1.7 | 1 |
| lineage1.2.2.2 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.6.1.2 | 1 |
| La1.7.1 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.6.4 | 2 |
| lineage4.2.1 | 1 |
| lineage4.3.2.1 | 4 |
| La3;M.canetti;lineage2.1;lineage4.9 | 11 |
| lineage2.2.1;lineage3 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La3;lineage4.9 | 11 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage6.1.1 | 2 |
| lineage3.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 3 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2 | 4 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage3 | 6 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.6.2.2 | 3 |
| lineage2.2.1.1 | 3 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;lineage2 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.1 | 2 |
| M.canetti;lineage2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 3 |
| lineage4.1;lineage4.9 | 2 |
| lineage5.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage4.1.1.1 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;lineage4 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| 23 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage4.6.1.1 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage3.1.1 | 1 |
| lineage4.9;lineage7 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.7;lineage4.2 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage1.1 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage3.1;lineage9 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage3.1.3 | 1 |
| lineage6.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 551 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046839 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR1035296 | HR-TB | lineage4.9 | br | SRR18003019 | Other | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173633 | Other | lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR369163 | Other | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045555 | Other | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR867545 | Other | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR978762 | Other | lineage4.8 | None | SRR14782054 | Other | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR2027263 | Other | lineage4 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR349265 | Other | lineage4.9 | None | ERR4819876 | Other | lineage4.3.4.2.1 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR1173706 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR23961529 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4769457 | Other | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR11465801 | Other | lineage4.3.4.1 | None | ERR4811030 | Other | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR2229143 | RR-TB | lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR1165699 | Other | lineage4.9 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR2228910 | Other | lineage4.8 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1172728 | RR-TB | La3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4769418 | Other | La1.2 | None | SRR7236330 | Other | La1.8.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR1172234 | Other | lineage4.9 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR1162864 | MDR-TB | lineage4.1.2.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | SRR3675222 | Other | La1.7 | None | ERR1043163 | Other | La3;M.canetti | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR25207373 | MDR-TB | lineage2.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR6359082 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR349266 | Other | lineage4.9 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR4829264 | Sensitive | lineage4.8 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1169194 | Other | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR6045548 | Other | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4799025 | Other | lineage4.8 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR1173778 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1173400 | Other | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR1173384 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR363498 | Other | lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1336820 | Sensitive | La3;M.canetti | None | SRR3675448 | Other | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR3801503 | Other | lineage4.6.2.2 | None | SRR5341453 | Other | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR363490 | Other | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | ERR11049020 | Other | lineage4.8 | None | ERR363445 | Other | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR363502 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR11081258 | Other | lineage4.8 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1510066 | RR-TB | lineage1.2.1.2.1 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR1043164 | Other | La3;M.canetti | None | SRR3675311 | Other | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5007165 | Other | lineage3 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR7240492 | MDR-TB | La1.7.1 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR978760 | RR-TB | lineage4.8 | None | ERR3283028 | Other | La3;lineage4 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR8692887 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR234659 | HR-TB | None | SRR7535086 | Other | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR987722 | MDR-TB | None | ERR212001 | HR-TB | None | SRR1172857 | Other | None | SRR7496517 | Other | None | ERR4407463 | HR-TB | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR978747 | Other | lineage4.8 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR1173355 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR12015086 | RR-TB | lineage4.8 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR702406 | Other | lineage2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR736848 | Other | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4810946 | MDR-TB | lineage2.2.1 | cn | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3797023 | MDR-TB | La1.8.1 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | ERR978693 | Other | lineage4.8 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6045371 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR12015084 | Other | lineage4.8 | None | SRR21732980 | Other | lineage4.3.3 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR8665994 | RR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR363447 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4769452 | Other | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR9786711 | Other | lineage4.6.2.2 | None | SRR6044835 | Other | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR5908228 | RR-TB | lineage4.3.3 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR4407452 | Other | lineage3 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR161037 | HR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR9119096 | RR-TB | lineage4.3.3 | None | ERR736856 | HR-TB | lineage4.9 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR3675572 | Other | None | ERR9786671 | Other | None | SRR1175074 | Other | None | ERR9786843 | Other | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR1640750 | RR-TB | None | SRR1184372 | MDR-TB | None | SRR6789626 | Other | None | SRR1196768 | MDR-TB | None | SRR12708416 | Sensitive | None | SRR28119777 | Other | lineage4.9 | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR363449 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR1336821 | Sensitive | La3;M.canetti | None | ERR373945 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR5341330 | Other | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR13423649 | Other | lineage2.2.1 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR6046815 | Other | lineage3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR6045503 | Other | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR369159 | Other | lineage4.9 | None | SRR1173788 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR1184381 | MDR-TB | None | ERR1063896 | HR-TB | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | ERR11252664 | Other | lineage2.2.1 | None | SRR18289200 | Other | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR1173363 | Other | None | SRR25827682 | Other | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR1196583 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675502 | Sensitive | lineage4.9 | None | ERR176766 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR3675507 | RR-TB | lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR363421 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR349300 | Other | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR369158 | Other | lineage4.9 | None | ERR12015085 | Other | lineage4.8 | None | ERR4769419 | Sensitive | lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
|---|
