SRR6046783
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR13289522
|
Sensitive
|
La3
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
SRR3675461
|
RR-TB
|
lineage4.9
|
None
|
SRR25515590
|
Sensitive
|
lineage2.2.1.2
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
SRR28858716
|
Sensitive
|
La3
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
ERR228223
|
Sensitive
|
La3
|
None
|
ERR6375123
|
Sensitive
|
La3
|
None
|
ERR6375137
|
Sensitive
|
La3
|
None
|
ERR13289968
|
Sensitive
|
La3;lineage2.2.1
|
None
|
SRR29053325
|
Sensitive
|
La3
|
None
|
SRR6045301
|
Other
|
La3
|
gb
|
ERR2659154
|
Sensitive
|
La3
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR11067404
|
Sensitive
|
La3
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
SRR10251185
|
Other
|
La3
|
None
|
SRR6046725
|
Other
|
La3
|
gb
|
ERR11043390
|
Sensitive
|
La3
|
None
|
SRR29096387
|
Sensitive
|
M.canetti;lineage4.9
|
None
|
ERR4822262
|
Sensitive
|
La1.8.1;La3
|
None
|
ERR4820063
|
Sensitive
|
La3
|
None
|
ERR6375120
|
Sensitive
|
La3
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR11466062
|
Sensitive
|
lineage4.9.1
|
None
|
ERR11049551
|
Sensitive
|
La3
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
ERR11050836
|
Sensitive
|
La3
|
None
|
ERR234682
|
Other
|
La3
|
None
|
SRR5642714
|
Sensitive
|
La3
|
None
|
SRR2101291
|
Other
|
La3
|
None
|
SRR5642712
|
Other
|
La3
|
None
|
ERR6375132
|
Sensitive
|
La3
|
None
|
ERR4821802
|
Sensitive
|
La3
|
gb
|
SRR28868577
|
Other
|
La3
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
SRR6046334
|
Sensitive
|
La3
|
None
|
ERR6375139
|
Other
|
La3
|
None
|
SRR7069245
|
Sensitive
|
La3
|
None
|
ERR4817427
|
Other
|
La3
|
None
|
SRR29053533
|
Sensitive
|
La3
|
None
|
ERR2517102
|
Sensitive
|
La3
|
gb
|
ERR330723
|
Other
|
La3
|
None
|
SRR2100577
|
Other
|
La3
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
SRR28351414
|
Other
|
La3
|
None
|
SRR28409674
|
Other
|
La3
|
None
|
ERR4820932
|
Other
|
La3
|
gb
|
ERR2513671
|
Other
|
La3
|
gb
|
SRR6045015
|
Other
|
La3
|
gb
|
ERR4799643
|
Other
|
La3
|
in
|
ERR4799479
|
Sensitive
|
La3
|
in
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
SRR10321130
|
Sensitive
|
La3
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4820543
|
Other
|
La3
|
None
|
SRR10251189
|
Sensitive
|
La3
|
None
|
SRR10251196
|
Sensitive
|
La3
|
None
|
SRR5642718
|
Sensitive
|
La3
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
SRR16057940
|
Sensitive
|
La3
|
None
|
SRR10251199
|
Sensitive
|
La3
|
None
|
ERR11049411
|
Sensitive
|
La3
|
None
|
SRR3675498
|
Sensitive
|
La3
|
gb
|
SRR27450483
|
Sensitive
|
La3
|
None
|
SRR28859928
|
Sensitive
|
La3
|
None
|
SRR29053502
|
Sensitive
|
La3
|
None
|
SRR27450025
|
Sensitive
|
La3
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
ERR6375125
|
Sensitive
|
La3
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR4816917
|
Other
|
La3
|
gb
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
SRR5642711
|
Other
|
La3
|
None
|
ERR017782
|
Other
|
La3
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR10321143
|
Other
|
La3
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
SRR7069989
|
Other
|
La3
|
None
|
SRR5642715
|
Other
|
La3
|
None
|
SRR6045604
|
Sensitive
|
La3
|
None
|
ERR9125596
|
Sensitive
|
La3
|
None
|
SRR10251192
|
Sensitive
|
La3
|
None
|
ERR13262070
|
Sensitive
|
La3
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3283028
|
Other
|
La3;lineage4
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR2659153
|
Other
|
La3
|
None
|
ERR4817463
|
Other
|
La3
|
gb
|
SRR7070072
|
Sensitive
|
La3
|
None
|
SRR2101161
|
Other
|
La3
|
None
|
ERR4799735
|
Other
|
La3
|
in
|
ERR11050692
|
Other
|
La3
|
None
|
ERR6375135
|
Other
|
La3
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
SRR16058583
|
Other
|
La3
|
None
|
ERR6375117
|
Other
|
La3
|
None
|
ERR4796515
|
Other
|
La3
|
in
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
ERR2199740
|
Sensitive
|
La3
|
None
|
SRR7069844
|
Sensitive
|
La3
|
None
|
SRR7069873
|
Sensitive
|
La3
|
None
|
SRR7070526
|
Sensitive
|
La3
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
SRR29053033
|
Sensitive
|
La3
|
None
|
SRR28170794
|
Other
|
La3
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
ERR3275709
|
HR-TB
|
lineage3
|
nl
|
ERR13289975
|
Sensitive
|
La3
|
None
|
ERR6375134
|
Other
|
La3
|
None
|
ERR4818160
|
Sensitive
|
La3
|
gb
|
SRR26112574
|
Other
|
La3
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
SRR16057982
|
Sensitive
|
La3
|
None
|
ERR6375133
|
Other
|
La3
|
None
|
SRR29052939
|
Sensitive
|
La3
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
SRR27450477
|
Other
|
La3
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR7131127
|
Other
|
La3
|
None
|
ERR6375136
|
Sensitive
|
La3
|
None
|
SRR10321134
|
Other
|
La3
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
ERR2514172
|
Sensitive
|
La3
|
gb
|
ERR11067403
|
Sensitive
|
La3
|
None
|
SRR28170839
|
Sensitive
|
La3
|
None
|
SRR29050770
|
Sensitive
|
lineage4.9
|
None
|
SRR29126907
|
Sensitive
|
lineage4.3.2
|
None
|
ERR2512788
|
Sensitive
|
La3
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR6044876
|
Sensitive
|
lineage4.9
|
None
|
SRR6046695
|
Other
|
La3
|
gb
|
ERR13289674
|
Sensitive
|
La3
|
None
|
ERR13291196
|
Sensitive
|
La3
|
None
|
SRR27450476
|
Sensitive
|
La3
|
None
|
SRR27450482
|
Sensitive
|
La3
|
None
|
ERR13289696
|
Sensitive
|
La3
|
None
|
SRR27450022
|
Sensitive
|
La3
|
None
|
SRR6045962
|
Sensitive
|
La3
|
gb
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
ERR13290040
|
Sensitive
|
La3
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR9125663
|
Other
|
La3
|
None
|
ERR9125148
|
Sensitive
|
La3
|
None
|
ERR4821658
|
Other
|
La3
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
SRR7070025
|
Other
|
La3
|
None
|
SRR28858676
|
Sensitive
|
La3
|
None
|
ERR11049107
|
Other
|
La3
|
None
|
SRR1180172
|
Other
|
lineage2.2.1
|
None
|
ERR3275607
|
Sensitive
|
La3
|
nl
|
SRR16089410
|
Other
|
La3
|
None
|
SRR10251188
|
Other
|
La3
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
ERR13291177
|
Sensitive
|
La3
|
None
|
ERR2517593
|
Other
|
La3
|
nl
|
SRR10251194
|
Other
|
La3
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
ERR2659156
|
Other
|
La3
|
None
|
SRR6046284
|
Other
|
lineage2.2.1
|
None
|
SRR1184024
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR29097054
|
Sensitive
|
lineage4.9
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
ERR2513625
|
Other
|
La3
|
gb
|
SRR7070522
|
Sensitive
|
La3
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
SRR29017081
|
Sensitive
|
lineage4.9
|
None
|
SRR27450188
|
Other
|
La3
|
None
|
SRR6045887
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR10315551
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4819164
|
Other
|
La3
|
None
|
ERR11067940
|
Sensitive
|
La3
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR234675
|
Sensitive
|
La3
|
None
|
ERR11067178
|
Other
|
La3
|
None
|
ERR2659155
|
Sensitive
|
La3
|
None
|
ERR4821950
|
Other
|
La3
|
None
|
ERR13291173
|
Sensitive
|
La3
|
None
|
ERR4797736
|
Sensitive
|
La3
|
in
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
ERR4817328
|
Sensitive
|
La3
|
None
|
ERR6375130
|
Other
|
La3
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR10321141
|
Sensitive
|
La3
|
None
|
ERR212001
|
HR-TB
|
|
None
|
ERR2446279
|
Sensitive
|
La3
|
nl
|
ERR6375115
|
HR-TB
|
La3
|
None
|
ERR2512533
|
Other
|
La3
|
gb
|
SRR6046235
|
Other
|
La3
|
gb
|
ERR4800242
|
Other
|
La3
|
in
|
ERR4821317
|
Other
|
La3
|
gb
|
ERR2200114
|
Sensitive
|
La3
|
de
|
ERR9125109
|
Sensitive
|
La3
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR4818222
|
Sensitive
|
La3
|
None
|
ERR4822142
|
Sensitive
|
La3
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
ERR11049614
|
Sensitive
|
La3;lineage4.1.2
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR6044939
|
Sensitive
|
La3
|
gb
|
ERR6375122
|
Sensitive
|
La3
|
None
|
ERR234676
|
Sensitive
|
La3
|
None
|
ERR9125087
|
Sensitive
|
La3
|
None
|
SRR25514999
|
Sensitive
|
lineage2.2.1.2
|
None
|
ERR2512942
|
Sensitive
|
La3
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
SRR25827418
|
XDR-TB
|
lineage3.1;lineage9
|
None
|
ERR3276253
|
Other
|
La3
|
nl
|
ERR4818708
|
Sensitive
|
La3
|
None
|
SRR27450484
|
Sensitive
|
La3
|
None
|
SRR7069409
|
Sensitive
|
La3
|
None
|
ERR2199741
|
Sensitive
|
La3
|
de
|
ERR2514578
|
Sensitive
|
La3
|
gb
|
ERR9125828
|
Sensitive
|
La3
|
None
|
ERR11068278
|
Other
|
La3
|
None
|
SRR10251193
|
Other
|
La3
|
None
|
ERR4820312
|
Sensitive
|
La3
|
None
|
ERR6375129
|
Other
|
La3
|
None
|
SRR26112207
|
Other
|
La3
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
SRR10321149
|
Sensitive
|
La3
|
None
|
ERR6375119
|
Sensitive
|
La3
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
SRR6046210
|
Other
|
lineage4.9
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
ERR6375141
|
Sensitive
|
La3
|
None
|
SRR5341432
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR4819952
|
Other
|
La3
|
None
|
SRR27450478
|
Other
|
La3
|
None
|
SRR10251198
|
Sensitive
|
La3
|
None
|
ERR351884
|
Other
|
La3
|
None
|
SRR16089392
|
Other
|
La3
|
None
|
SRR10251197
|
Sensitive
|
La3
|
None
|
ERR4818572
|
Other
|
La3
|
None
|
ERR4798322
|
Sensitive
|
La3
|
in
|
ERR4814716
|
Sensitive
|
La3
|
None
|
ERR4815024
|
Sensitive
|
La3
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
SRR27450393
|
Other
|
La3
|
None
|
ERR13290205
|
Sensitive
|
La3
|
None
|
ERR13264906
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR13291776
|
Sensitive
|
La3
|
None
|
ERR13290070
|
Sensitive
|
La3
|
None
|
SRR10321128
|
Other
|
La3
|
None
|
SRR29231281
|
Sensitive
|
La3
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
ERR2513195
|
Sensitive
|
La3
|
gb
|
SRR27450611
|
Other
|
La3
|
None
|
ERR13290109
|
Sensitive
|
La3
|
None
|
SRR6046131
|
Other
|
La3
|
None
|
ERR4821002
|
Other
|
La3
|
None
|
SRR24061596
|
HR-TB
|
lineage4.4.1.1
|
None
|
ERR4800046
|
Sensitive
|
La3
|
in
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
SRR29096174
|
Sensitive
|
La1.7;lineage4.9
|
None
|
ERR6375118
|
Other
|
La3
|
None
|
ERR2199829
|
Other
|
La3
|
de
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
SRR29053271
|
Sensitive
|
La3
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR10251195
|
Sensitive
|
La3
|
None
|
SRR10251202
|
Sensitive
|
La3
|
None
|
ERR6375128
|
Other
|
La3
|
None
|
ERR6375124
|
Other
|
La3
|
None
|
ERR019856
|
Other
|
La3
|
None
|
SRR16058605
|
Sensitive
|
La3
|
None
|
SRR10251200
|
Sensitive
|
La3
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR13267604
|
Sensitive
|
La3
|
None
|
SRR30182773
|
Sensitive
|
La3
|
None
|
SRR6045399
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR6375126
|
Other
|
La3
|
None
|
ERR6375140
|
Other
|
La3
|
None
|
ERR386816
|
Sensitive
|
La3
|
None
|
SRR10251191
|
Other
|
La3
|
None
|
ERR11081198
|
Other
|
La3
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
SRR5642717
|
Other
|
La3
|
None
|
SRR29097066
|
Sensitive
|
lineage4.9
|
None
|
SRR6046594
|
Sensitive
|
lineage4.9
|
None
|
SRR6797355
|
Sensitive
|
La3
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
SRR3675441
|
Other
|
lineage4.9
|
None
|
ERR13289541
|
Sensitive
|
La3
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR2514957
|
Sensitive
|
La3
|
gb
|
SRR6045519
|
MDR-TB
|
M.canetti;lineage4.9
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
ERR9125525
|
Other
|
La3
|
None
|
SRR29056019
|
Other
|
La3
|
None
|
SRR16058369
|
Other
|
La3
|
None
|
ERR11465511
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR6375138
|
Other
|
La3
|
None
|
ERR13291178
|
Sensitive
|
La3
|
None
|
SRR29053316
|
Sensitive
|
La3
|
None
|
SRR27450480
|
Other
|
La3
|
None
|
ERR6375121
|
Other
|
La3
|
None
|
ERR4796505
|
Sensitive
|
La3
|
in
|
ERR4820516
|
Sensitive
|
La3
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
ERR294241
|
Other
|
La3
|
None
|
SRR2101222
|
Sensitive
|
La3
|
None
|
ERR6375142
|
Sensitive
|
La3
|
None
|
ERR11252664
|
Other
|
lineage2.2.1
|
None
|
SRR6046736
|
Sensitive
|
La3;lineage2.2.1
|
gb
|
SRR25515345
|
Sensitive
|
lineage2.2.1.2
|
None
|
ERR4821662
|
Other
|
La3
|
gb
|
SRR10321138
|
Other
|
La3
|
None
|
ERR4799118
|
Sensitive
|
La3
|
in
|
SRR3675510
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR29052772
|
Sensitive
|
La3
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
ERR6375116
|
HR-TB
|
La3
|
None
|
ERR2514738
|
Sensitive
|
La3
|
None
|
SRR28351652
|
Sensitive
|
La3
|
None
|
ERR2512826
|
Sensitive
|
La3
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
ERR4815064
|
Other
|
La3
|
gb
|
SRR16058599
|
Other
|
La3
|
None
|
ERR2514178
|
Sensitive
|
La3
|
None
|
SRR5341373
|
Other
|
lineage4.9
|
None
|
ERR4817778
|
Sensitive
|
La3
|
gb
|
SRR27450479
|
Other
|
La3
|
None
|
SRR7070129
|
Sensitive
|
La3
|
None
|
SRR5642716
|
Sensitive
|
La3
|
None
|
SRR6045425
|
Sensitive
|
La3
|
gb
|
SRR16058093
|
Sensitive
|
La3
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR2512389
|
Other
|
La3
|
gb
|
SRR10251190
|
Sensitive
|
La3
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR10251187
|
Sensitive
|
La3
|
None
|
SRR22048363
|
Other
|
La3
|
None
|
ERR11050970
|
Sensitive
|
La3
|
None
|
ERR2515051
|
Other
|
La3
|
None
|
ERR015582
|
Sensitive
|
La3
|
None
|
ERR6375127
|
Other
|
La3
|
None
|
ERR4815417
|
Other
|
La3
|
gb
|
SRR10251186
|
Other
|
La3
|
None
|
ERR4814915
|
Other
|
La3
|
None
|
ERR11049303
|
Sensitive
|
La3
|
None
|
SRR7069127
|
Other
|
La3
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
SRR5642713
|
Other
|
La3
|
None
|
ERR4829235
|
Other
|
La3
|
None
|
ERR13290071
|
Sensitive
|
La3
|
None
|
ERR13289791
|
Sensitive
|
La3
|
None
|
SRR16089393
|
Other
|
La3
|
None
|
SRR5341293
|
Sensitive
|
lineage4.9
|
None
|
ERR216965
|
Sensitive
|
lineage4.9
|
None
|
ERR6375131
|
Sensitive
|
La3
|
None
|
SRR1735564
|
Sensitive
|
La3
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
SRR26112175
|
Other
|
La3
|
None
|
ERR4820192
|
Other
|
La3
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
SRR16089402
|
Other
|
La3
|
None
|
SRR6964572
|
MDR-TB
|
lineage3
|
None
|