Rv0006 - c.1629C>T

Drug resistance types
141 Sensitive 1 RR-TB 54 HR-TB 4 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 34 Other
lineage Counts
lineage Count
La3 127
lineage4.3.4.2.1 2
lineage2.2.1;La3 1
lineage2.1 1
32
lineage4.9 17
lineage4 21
lineage4.1 1
M.orygis 1
lineage2.2.1 10
lineage3 2
La3;La1.8.1 1
lineage4.9.1 1
lineage4.4.1.2 1
lineage4.4.2 1
lineage4.3.1 1
La1.8.1 1
lineage4;lineage3.1 1
La1.2 1
lineage4.5 1
lineage2.2.1.2 4
lineage2.2.1.1 3
lineage7;lineage2.2.1.2 1
lineage2.2 2
lineage4.4.1.1 1
lineage9;lineage3.1 1
spoligotype Counts
spoligotype Count
None 236
Geographic prevalence
Country level data for this variant is available for 48 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4815024 Sensitive La3 None
SRR6045015 Sensitive La3 gb
SRR6046695 Sensitive La3 gb
SRR6045425 Sensitive La3 gb
SRR6045962 Sensitive La3 gb
SRR6046235 Sensitive La3 gb
ERR2199741 Sensitive La3 de
ERR2199829 Sensitive La3 de
ERR2200114 Sensitive La3 de
SRR6044858 Sensitive La3 gb
ERR161034 Other lineage4.3.4.2.1 None
SRR6046736 Sensitive lineage2.2.1;La3 gb
SRR6044939 Sensitive La3 gb
SRR6045301 Sensitive La3 gb
SRR6046725 Sensitive La3 gb
ERR4814969 Sensitive La3 None
SRR5341422 HR-TB lineage2.1 None
ERR212001 HR-TB None
SRR3675510 Other None
ERR212034 HR-TB None
ERR216965 HR-TB lineage4.9 None
SRR3675571 HR-TB None
ERR4817427 Other La3 None
ERR3275607 Sensitive La3 nl
ERR3276253 Sensitive La3 nl
SRR4034482 Sensitive lineage4 None
ERR228223 Sensitive La3 None
ERR4818708 Sensitive La3 None
ERR2446566 Other lineage4.1 None
ERR234676 Sensitive La3 None
ERR2512942 Sensitive M.orygis None
ERR4818222 Sensitive La3 None
ERR4818572 Sensitive La3 None
ERR234675 Sensitive La3 None
ERR234682 Sensitive La3 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR3275709 HR-TB lineage3 nl
ERR4818536 Other lineage4.9 None
ERR2512788 Sensitive La3 None
ERR2512826 Sensitive La3 None
ERR4819164 Sensitive La3 None
SRR5341373 HR-TB lineage4 None
SRR2101291 Sensitive La3 None
SRR2100577 Sensitive La3 None
ERR4820312 Sensitive La3 None
SRR5341400 HR-TB lineage4 None
ERR2514178 Sensitive La3 None
ERR4819462 Other lineage4 None
SRR5341432 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341293 HR-TB lineage4 None
ERR4820516 Sensitive La3 None
ERR4821002 Other La3 None
ERR2514738 Sensitive La3 None
ERR4820543 Other La3 None
SRR5341313 HR-TB None
SRR5341315 Sensitive None
ERR2515051 Sensitive La3 None
SRR2101161 Sensitive La3 None
SRR2101222 Sensitive La3 None
ERR4820192 Other La3 None
ERR4819952 Sensitive La3 None
ERR2693238 HR-TB lineage4.9 None
SRR3675498 Sensitive La3 gb
ERR2446279 Sensitive La3 nl
SRR6045450 Other lineage4.9 None
ERR4821950 Sensitive La3 None
SRR6045519 HR-TB None
SRR5535933 HR-TB None
ERR2659155 Sensitive La3 None
ERR4821658 Other La3 None
ERR4821413 Other La3 None
ERR4822262 Sensitive La3;La1.8.1 None
SRR6045555 HR-TB None
SRR6046141 Other lineage4.9 None
SRR6045604 Sensitive La3 None
SRR6045832 HR-TB lineage4.9 None
SRR6046131 Sensitive La3 None
SRR6046133 HR-TB None
SRR6044838 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6046253 HR-TB lineage4.9 None
SRR6046210 Other lineage4 None
SRR6045399 Other None
SRR6046334 Sensitive La3 None
SRR6046284 Sensitive lineage2.2.1 None
ERR4797736 Sensitive La3 in
SRR6046362 HR-TB None
ERR4796515 Sensitive La3 in
ERR4796505 Sensitive La3 in
ERR2517102 Sensitive La3 gb
ERR2517593 Sensitive La3 nl
ERR4799118 Sensitive La3 in
ERR4798322 Sensitive La3 in
SRR6046460 HR-TB None
SRR6046594 HR-TB lineage4 None
ERR4799479 Sensitive La3 in
ERR4799643 Sensitive La3 in
ERR4800242 Sensitive La3 in
ERR4800046 Sensitive La3 in
ERR4799735 Sensitive La3 in
ERR11466062 Sensitive lineage4.9.1 None
ERR4816917 Sensitive La3 gb
ERR294241 Sensitive La3 None
ERR4815064 Sensitive La3 gb
SRR6797355 Sensitive La3 None
ERR4817463 Other La3 gb
ERR4817778 Sensitive La3 gb
ERR4831117 HR-TB None
SRR6964572 MDR-TB lineage3 None
ERR4815417 Other La3 gb
ERR4818160 Sensitive La3 gb
SRR7496471 Sensitive None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323045 HR-TB None
DRR188519 Other lineage4.4.2 None
ERR017782 Other La3 None
ERR2512533 Sensitive La3 gb
ERR019856 Other La3 None
ERR1034634 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR2512389 Sensitive La3 gb
ERR11465511 Sensitive lineage4.3.4.2.1 None
ERR1063855 Other lineage4 None
ERR4821662 Sensitive La3 gb
ERR11043390 Sensitive La3 None
ERR4820932 Sensitive La3 gb
ERR1215483 Sensitive lineage4.3.1 None
ERR4821802 Sensitive La3 gb
ERR3283031 HR-TB None
ERR3283014 HR-TB None
ERR3283028 Other None
ERR330723 Sensitive La3 None
ERR3283057 HR-TB lineage4 None
ERR2513195 Sensitive La3 gb
ERR2513625 Sensitive La3 gb
ERR4821317 Sensitive La3 gb
ERR3283047 HR-TB None
ERR3283055 HR-TB None
ERR3797046 HR-TB None
ERR351884 Sensitive La3 None
ERR3797048 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797060 Other La1.8.1 None
ERR405209 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797087 Sensitive lineage4 None
ERR3797063 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR386816 Sensitive La3 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR473323 HR-TB lineage4.9 None
ERR4188247 HR-TB None
ERR4596910 Sensitive lineage4 None
ERR4769497 HR-TB La1.2 None
ERR4769444 HR-TB lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769474 HR-TB lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR2514172 Sensitive La3 gb
ERR2513671 Sensitive La3 gb
ERR2514578 Sensitive La3 gb
ERR2514957 Sensitive La3 gb
ERR6375120 Sensitive La3 None
ERR6359074 HR-TB lineage4.9 None
ERR6375116 HR-TB La3 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4811493 HR-TB None
ERR6359045 HR-TB None
ERR6375118 Sensitive La3 None
ERR6375121 Sensitive La3 None
ERR6375131 Sensitive La3 None
ERR6375123 Sensitive La3 None
ERR6375126 Sensitive La3 None
ERR6375127 Sensitive La3 None
ERR6375137 Sensitive La3 None
ERR6375130 Sensitive La3 None
ERR6375134 Sensitive La3 None
ERR6375132 Sensitive La3 None
ERR6375135 Sensitive La3 None
ERR752229 Other lineage4.5 None
ERR736837 Other lineage4.9 None
ERR736848 HR-TB None
ERR736856 HR-TB lineage4 None
ERR6375141 Sensitive La3 None
ERR6375140 Sensitive La3 None
ERR9125148 Sensitive La3 None
SRR26112175 Sensitive La3 None
ERR9125087 Sensitive La3 None
SRR26112207 Sensitive La3 None
ERR9634265 Sensitive None
ERR9125828 Sensitive La3 None
SRR10315551 Sensitive lineage2.2.1 None
SRR1173632 RR-TB lineage2.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172885 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR16058369 Sensitive La3 None
SRR16057982 Sensitive La3 None
SRR16058093 Sensitive La3 None
SRR20632814 Sensitive lineage4 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR16058605 Sensitive La3 None
SRR20970016 Other lineage2.2 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR27450393 Sensitive La3 None
SRR24061596 HR-TB lineage4.4.1.1 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR22048363 Sensitive La3 None
SRR27450483 Sensitive La3 None
SRR27450484 Sensitive La3 None
SRR27450022 Sensitive La3 None
SRR27450188 Sensitive La3 None
SRR27450025 Sensitive La3 None
SRR27450477 Sensitive La3 None
SRR27450479 Sensitive La3 None
SRR27450478 Sensitive La3 None
SRR27450480 Sensitive La3 None
SRR27450611 Sensitive La3 None
SRR25514999 Sensitive lineage2.2.1.2 None
SRR25515590 Sensitive lineage2.2.1.2 None
SRR28170794 Sensitive La3 None
SRR27450482 Sensitive La3 None
SRR27450476 Sensitive La3 None
SRR28170839 Sensitive La3 None